Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LHX2P50458 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.51□□□□□ -0.41
LHX2P50458 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.51□□□□□ -0.41
LHX2P50458 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LHX2P50458 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 OR2W2P-201ENST00000406313 909 ntBASIC12.51□□□□□ -0.41
LHX2P50458 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC12.51□□□□□ -0.41
LHX2P50458 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LHX2P50458 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.51□□□□□ -0.41
LHX2P50458 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.51□□□□□ -0.41
LHX2P50458 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.51□□□□□ -0.41
LHX2P50458 STK24P1-201ENST00000455035 1291 ntBASIC12.51□□□□□ -0.41
LHX2P50458 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.51□□□□□ -0.41
LHX2P50458 RN7SL375P-201ENST00000492442 298 ntBASIC12.51□□□□□ -0.41
LHX2P50458 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.51□□□□□ -0.41
LHX2P50458 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.51□□□□□ -0.41
LHX2P50458 AL132994.1-201ENST00000554098 400 ntBASIC12.51□□□□□ -0.41
LHX2P50458 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC12.51□□□□□ -0.41
LHX2P50458 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LHX2P50458 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.51□□□□□ -0.41
LHX2P50458 AL009176.1-201ENST00000607876 650 ntBASIC12.51□□□□□ -0.41
LHX2P50458 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LHX2P50458 AL161773.1-201ENST00000624845 863 ntBASIC12.51□□□□□ -0.41
LHX2P50458 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LHX2P50458 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LHX2P50458 AGAP10P-201ENST00000454844 2418 ntBASIC12.51□□□□□ -0.41
LHX2P50458 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.51□□□□□ -0.41
LHX2P50458 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.51□□□□□ -0.41
LHX2P50458 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LHX2P50458 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.51□□□□□ -0.41
LHX2P50458 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LHX2P50458 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LHX2P50458 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LHX2P50458 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
LHX2P50458 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
LHX2P50458 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.5□□□□□ -0.41
LHX2P50458 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LHX2P50458 MIR1307-201ENST00000408840 149 ntBASIC12.5□□□□□ -0.41
LHX2P50458 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.5□□□□□ -0.41
LHX2P50458 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 RN7SKP155-201ENST00000516031 288 ntBASIC12.5□□□□□ -0.41
LHX2P50458 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC12.5□□□□□ -0.41
LHX2P50458 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.5□□□□□ -0.41
LHX2P50458 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.5□□□□□ -0.41
LHX2P50458 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.5□□□□□ -0.41
LHX2P50458 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
LHX2P50458 AC012073.1-201ENST00000606114 1108 ntBASIC12.5□□□□□ -0.41
LHX2P50458 U62317.3-201ENST00000608319 855 ntBASIC12.5□□□□□ -0.41
LHX2P50458 AC105137.3-201ENST00000617588 984 ntBASIC12.5□□□□□ -0.41
LHX2P50458 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.5□□□□□ -0.41
LHX2P50458 ST5-261ENST00000626808 1071 ntTSL 5 BASIC12.5□□□□□ -0.41
LHX2P50458 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.5□□□□□ -0.41
LHX2P50458 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.5□□□□□ -0.41
LHX2P50458 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
LHX2P50458 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.5□□□□□ -0.41
LHX2P50458 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LHX2P50458 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.5□□□□□ -0.41
LHX2P50458 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.5□□□□□ -0.41
LHX2P50458 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms