Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.14□□□□□ -0.15
MDH1P40925 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.14□□□□□ -0.15
MDH1P40925 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.14□□□□□ -0.15
MDH1P40925 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 AC011495.1-201ENST00000498085 584 ntBASIC14.14□□□□□ -0.15
MDH1P40925 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.14□□□□□ -0.15
MDH1P40925 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.14□□□□□ -0.15
MDH1P40925 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.14□□□□□ -0.15
MDH1P40925 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
MDH1P40925 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.14□□□□□ -0.15
MDH1P40925 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC14.14□□□□□ -0.15
MDH1P40925 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
MDH1P40925 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
MDH1P40925 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.14□□□□□ -0.15
MDH1P40925 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
MDH1P40925 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC14.14□□□□□ -0.15
MDH1P40925 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.14□□□□□ -0.15
MDH1P40925 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
MDH1P40925 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 LINC02228-202ENST00000641261 2489 ntBASIC14.14□□□□□ -0.15
MDH1P40925 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 IL9RP3-201ENST00000442856 1674 ntBASIC14.14□□□□□ -0.15
MDH1P40925 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC14.14□□□□□ -0.15
MDH1P40925 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MDH1P40925 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
MDH1P40925 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC14.13□□□□□ -0.15
MDH1P40925 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.13□□□□□ -0.15
MDH1P40925 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.13□□□□□ -0.15
MDH1P40925 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC14.13□□□□□ -0.15
MDH1P40925 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
MDH1P40925 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
MDH1P40925 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.13□□□□□ -0.15
MDH1P40925 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.13□□□□□ -0.15
MDH1P40925 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 MYCLP2-201ENST00000449268 967 ntBASIC14.13□□□□□ -0.15
MDH1P40925 AC093433.1-201ENST00000458048 571 ntBASIC14.13□□□□□ -0.15
MDH1P40925 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.13□□□□□ -0.15
MDH1P40925 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.13□□□□□ -0.15
MDH1P40925 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.13□□□□□ -0.15
MDH1P40925 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
MDH1P40925 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.13□□□□□ -0.15
MDH1P40925 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.13□□□□□ -0.15
MDH1P40925 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.13□□□□□ -0.15
MDH1P40925 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.13□□□□□ -0.15
MDH1P40925 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.13□□□□□ -0.15
MDH1P40925 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.13□□□□□ -0.15
MDH1P40925 CCT8L1P-201ENST00000465400 1674 ntBASIC14.13□□□□□ -0.15
MDH1P40925 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC14.13□□□□□ -0.15
MDH1P40925 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
MDH1P40925 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC14.13□□□□□ -0.15
MDH1P40925 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
MDH1P40925 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC14.13□□□□□ -0.15
MDH1P40925 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MDH1P40925 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC14.13□□□□□ -0.15
MDH1P40925 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
MDH1P40925 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MDH1P40925 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MDH1P40925 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
MDH1P40925 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
MDH1P40925 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
MDH1P40925 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MDH1P40925 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MDH1P40925 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.12□□□□□ -0.15
MDH1P40925 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MDH1P40925 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms