Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC16.08■□□□□ 0.16
CLCN1P35523 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CLCN1P35523 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC16.08■□□□□ 0.16
CLCN1P35523 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CLCN1P35523 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CLCN1P35523 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CLCN1P35523 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.08■□□□□ 0.16
CLCN1P35523 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC16.08■□□□□ 0.16
CLCN1P35523 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CLCN1P35523 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.08■□□□□ 0.16
CLCN1P35523 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC16.08■□□□□ 0.16
CLCN1P35523 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CLCN1P35523 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CLCN1P35523 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
CLCN1P35523 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CLCN1P35523 AL358933.1-201ENST00000565046 2830 ntBASIC16.08■□□□□ 0.16
CLCN1P35523 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLCN1P35523 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
CLCN1P35523 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCN1P35523 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CLCN1P35523 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CLCN1P35523 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CLCN1P35523 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC16.07■□□□□ 0.16
CLCN1P35523 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
CLCN1P35523 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CLCN1P35523 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCN1P35523 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.07■□□□□ 0.16
CLCN1P35523 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CLCN1P35523 ACTG1P3-201ENST00000431775 1114 ntBASIC16.07■□□□□ 0.16
CLCN1P35523 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCN1P35523 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.07■□□□□ 0.16
CLCN1P35523 AC009486.1-201ENST00000569860 813 ntBASIC16.07■□□□□ 0.16
CLCN1P35523 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.07■□□□□ 0.16
CLCN1P35523 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCN1P35523 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCN1P35523 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC16.07■□□□□ 0.16
CLCN1P35523 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.07■□□□□ 0.16
CLCN1P35523 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCN1P35523 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC16.07■□□□□ 0.16
CLCN1P35523 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CLCN1P35523 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCN1P35523 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 CCT7P1-201ENST00000406551 1611 ntBASIC16.07■□□□□ 0.16
CLCN1P35523 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCN1P35523 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.07■□□□□ 0.16
CLCN1P35523 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCN1P35523 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCN1P35523 OS9-203ENST00000389142 2457 ntTSL 5 BASIC16.07■□□□□ 0.16
CLCN1P35523 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CLCN1P35523 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCN1P35523 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCN1P35523 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCN1P35523 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCN1P35523 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms