Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC16.25■□□□□ 0.19
COL4A5P29400 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A5P29400 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A5P29400 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A5P29400 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A5P29400 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A5P29400 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A5P29400 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A5P29400 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A5P29400 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A5P29400 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC16.25■□□□□ 0.19
COL4A5P29400 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
COL4A5P29400 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A5P29400 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A5P29400 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A5P29400 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
COL4A5P29400 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A5P29400 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
COL4A5P29400 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL4A5P29400 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A5P29400 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC16.25■□□□□ 0.19
COL4A5P29400 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC16.24■□□□□ 0.19
COL4A5P29400 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
COL4A5P29400 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A5P29400 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC16.24■□□□□ 0.19
COL4A5P29400 COQ4-202ENST00000372875 928 ntTSL 2 BASIC16.24■□□□□ 0.19
COL4A5P29400 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC16.24■□□□□ 0.19
COL4A5P29400 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC16.24■□□□□ 0.19
COL4A5P29400 PRDX3P2-201ENST00000447051 611 ntBASIC16.24■□□□□ 0.19
COL4A5P29400 RN7SL479P-201ENST00000472003 300 ntBASIC16.24■□□□□ 0.19
COL4A5P29400 AC010395.2-201ENST00000509899 904 ntBASIC16.24■□□□□ 0.19
COL4A5P29400 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC16.24■□□□□ 0.19
COL4A5P29400 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC16.24■□□□□ 0.19
COL4A5P29400 KRT18P8-201ENST00000581937 1246 ntBASIC16.24■□□□□ 0.19
COL4A5P29400 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
COL4A5P29400 AC010601.2-201ENST00000623060 774 ntBASIC16.24■□□□□ 0.19
COL4A5P29400 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A5P29400 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A5P29400 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC16.24■□□□□ 0.19
COL4A5P29400 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COL4A5P29400 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A5P29400 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A5P29400 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A5P29400 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A5P29400 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC16.24■□□□□ 0.19
COL4A5P29400 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A5P29400 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A5P29400 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A5P29400 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A5P29400 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A5P29400 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC16.24■□□□□ 0.19
COL4A5P29400 CA6-205ENST00000480186 1493 ntTSL 2 BASIC16.24■□□□□ 0.19
COL4A5P29400 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
COL4A5P29400 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC16.24■□□□□ 0.19
COL4A5P29400 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A5P29400 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A5P29400 AL390755.1-201ENST00000623716 2027 ntBASIC16.24■□□□□ 0.19
COL4A5P29400 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
COL4A5P29400 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.24■□□□□ 0.19
COL4A5P29400 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC16.24■□□□□ 0.19
COL4A5P29400 CACYBPP3-201ENST00000406011 625 ntBASIC16.24■□□□□ 0.19
COL4A5P29400 NOS2P3-201ENST00000411468 867 ntBASIC16.24■□□□□ 0.19
COL4A5P29400 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC16.24■□□□□ 0.19
COL4A5P29400 AP000346.2-202ENST00000425948 383 ntBASIC16.24■□□□□ 0.19
COL4A5P29400 NOS2P2-201ENST00000426269 867 ntBASIC16.24■□□□□ 0.19
COL4A5P29400 RN7SL677P-201ENST00000466970 319 ntBASIC16.24■□□□□ 0.19
COL4A5P29400 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC16.24■□□□□ 0.19
COL4A5P29400 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
COL4A5P29400 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC16.24■□□□□ 0.19
COL4A5P29400 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
COL4A5P29400 NEMF-210ENST00000556672 590 ntTSL 2 BASIC16.24■□□□□ 0.19
COL4A5P29400 NAT9-204ENST00000578822 839 ntTSL 3 BASIC16.24■□□□□ 0.19
COL4A5P29400 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A5P29400 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL4A5P29400 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
COL4A5P29400 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL4A5P29400 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL4A5P29400 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL4A5P29400 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
COL4A5P29400 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL4A5P29400 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
COL4A5P29400 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL4A5P29400 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL4A5P29400 AC016397.2-201ENST00000624848 1985 ntBASIC16.23■□□□□ 0.19
COL4A5P29400 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.23■□□□□ 0.19
COL4A5P29400 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.23■□□□□ 0.19
COL4A5P29400 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL4A5P29400 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL4A5P29400 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
COL4A5P29400 AL356653.1-201ENST00000402743 360 ntBASIC16.23■□□□□ 0.19
COL4A5P29400 TMEM256P1-201ENST00000430550 340 ntBASIC16.23■□□□□ 0.19
COL4A5P29400 AK2P2-201ENST00000439142 405 ntBASIC16.23■□□□□ 0.19
COL4A5P29400 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC16.23■□□□□ 0.19
COL4A5P29400 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL4A5P29400 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL4A5P29400 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC16.23■□□□□ 0.19
COL4A5P29400 AL136298.3-201ENST00000556746 445 ntBASIC16.23■□□□□ 0.19
COL4A5P29400 AC104759.1-201ENST00000559109 939 ntBASIC16.23■□□□□ 0.19
COL4A5P29400 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC16.23■□□□□ 0.19
COL4A5P29400 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms