Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TPM3P06753 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TPM3P06753 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM3P06753 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC15.86■□□□□ 0.13
TPM3P06753 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TPM3P06753 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TPM3P06753 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM3P06753 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.85■□□□□ 0.13
TPM3P06753 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.85■□□□□ 0.13
TPM3P06753 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 AC025183.3-201ENST00000623526 1482 ntBASIC15.85■□□□□ 0.13
TPM3P06753 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.85■□□□□ 0.13
TPM3P06753 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TPM3P06753 AC022364.1-202ENST00000617468 2409 ntBASIC15.85■□□□□ 0.13
TPM3P06753 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC15.85■□□□□ 0.13
TPM3P06753 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TPM3P06753 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.85■□□□□ 0.13
TPM3P06753 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.85■□□□□ 0.13
TPM3P06753 INE1-201ENST00000456273 945 ntBASIC15.85■□□□□ 0.13
TPM3P06753 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.85■□□□□ 0.13
TPM3P06753 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.85■□□□□ 0.13
TPM3P06753 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.85■□□□□ 0.13
TPM3P06753 AC106820.3-201ENST00000561653 397 ntBASIC15.85■□□□□ 0.13
TPM3P06753 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.85■□□□□ 0.13
TPM3P06753 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.85■□□□□ 0.13
TPM3P06753 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TPM3P06753 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.85■□□□□ 0.13
TPM3P06753 AC027601.3-201ENST00000622907 509 ntBASIC15.85■□□□□ 0.13
TPM3P06753 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.85■□□□□ 0.13
TPM3P06753 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TPM3P06753 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
TPM3P06753 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.85■□□□□ 0.13
TPM3P06753 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TPM3P06753 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.85■□□□□ 0.13
TPM3P06753 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC15.85■□□□□ 0.13
TPM3P06753 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TPM3P06753 AC090114.2-201ENST00000608477 7054 ntBASIC15.85■□□□□ 0.13
TPM3P06753 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC15.85■□□□□ 0.13
TPM3P06753 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TPM3P06753 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC15.85■□□□□ 0.13
TPM3P06753 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM3P06753 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM3P06753 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TPM3P06753 AC027369.3-201ENST00000530465 3707 ntBASIC15.84■□□□□ 0.13
TPM3P06753 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM3P06753 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM3P06753 NPTN-IT1-201ENST00000628401 2283 ntBASIC15.84■□□□□ 0.13
TPM3P06753 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
TPM3P06753 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM3P06753 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TPM3P06753 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TPM3P06753 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM3P06753 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM3P06753 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TPM3P06753 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM3P06753 SALL4P6-201ENST00000429385 1691 ntBASIC15.84■□□□□ 0.13
TPM3P06753 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM3P06753 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM3P06753 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM3P06753 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.84■□□□□ 0.13
TPM3P06753 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.84■□□□□ 0.13
TPM3P06753 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.84■□□□□ 0.13
TPM3P06753 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.84■□□□□ 0.13
TPM3P06753 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.84■□□□□ 0.13
TPM3P06753 AC012441.1-201ENST00000446669 685 ntBASIC15.84■□□□□ 0.13
TPM3P06753 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM3P06753 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.84■□□□□ 0.13
TPM3P06753 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.84■□□□□ 0.13
TPM3P06753 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM3P06753 AL021155.1-201ENST00000438808 2637 ntBASIC15.84■□□□□ 0.13
TPM3P06753 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TPM3P06753 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM3P06753 BX324167.2-201ENST00000623717 3316 ntBASIC15.84■□□□□ 0.13
TPM3P06753 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM3P06753 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM3P06753 AC061965.1-201ENST00000560524 1465 ntBASIC15.84■□□□□ 0.13
TPM3P06753 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC15.84■□□□□ 0.13
TPM3P06753 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TPM3P06753 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM3P06753 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TPM3P06753 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TPM3P06753 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TPM3P06753 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms