Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 INGX-202ENST00000489074 768 ntBASIC17.38■□□□□ 0.37
UPF2Q9HAU5 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 AC008494.3-201ENST00000606615 944 ntBASIC17.38■□□□□ 0.37
UPF2Q9HAU5 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 AC115284.2-201ENST00000624646 2054 ntBASIC17.38■□□□□ 0.37
UPF2Q9HAU5 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 ACTG1P3-201ENST00000431775 1114 ntBASIC17.37■□□□□ 0.37
UPF2Q9HAU5 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 RNA5SP486-201ENST00000515961 83 ntBASIC17.37■□□□□ 0.37
UPF2Q9HAU5 TDH-203ENST00000531764 1110 ntBASIC17.37■□□□□ 0.37
UPF2Q9HAU5 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 AC005498.2-205ENST00000593218 784 ntBASIC17.37■□□□□ 0.37
UPF2Q9HAU5 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 RPSAP52-203ENST00000622976 1023 ntBASIC17.37■□□□□ 0.37
UPF2Q9HAU5 AL031719.1-201ENST00000623365 2587 ntBASIC17.37■□□□□ 0.37
UPF2Q9HAU5 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 AC025183.3-201ENST00000623526 1482 ntBASIC17.37■□□□□ 0.37
UPF2Q9HAU5 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UPF2Q9HAU5 REXO1L6P-201ENST00000603433 1515 ntBASIC17.37■□□□□ 0.37
UPF2Q9HAU5 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 LINC02084-201ENST00000606069 1096 ntBASIC17.36■□□□□ 0.37
UPF2Q9HAU5 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 AL139385.1-201ENST00000611744 3272 ntBASIC17.36■□□□□ 0.37
UPF2Q9HAU5 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 AC060814.4-201ENST00000594169 2163 ntBASIC17.36■□□□□ 0.37
UPF2Q9HAU5 AC007952.5-201ENST00000572818 1486 ntBASIC17.36■□□□□ 0.37
UPF2Q9HAU5 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF2Q9HAU5 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms