Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
USB1Q9BQ65 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.89□□□□□ -0.35
USB1Q9BQ65 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 TUBBP5-203ENST00000508529 1334 ntBASIC12.88□□□□□ -0.35
USB1Q9BQ65 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 AC019294.4-201ENST00000561777 2905 ntBASIC12.88□□□□□ -0.35
USB1Q9BQ65 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 RNU6-233P-201ENST00000410845 141 ntBASIC12.88□□□□□ -0.35
USB1Q9BQ65 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 SLC25A24P2-201ENST00000415059 510 ntBASIC12.88□□□□□ -0.35
USB1Q9BQ65 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 AC016700.1-201ENST00000429424 312 ntBASIC12.88□□□□□ -0.35
USB1Q9BQ65 NKAIN1P1-201ENST00000435754 582 ntBASIC12.88□□□□□ -0.35
USB1Q9BQ65 AC006335.1-201ENST00000445200 547 ntBASIC12.88□□□□□ -0.35
USB1Q9BQ65 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 CICP12-201ENST00000455801 843 ntBASIC12.88□□□□□ -0.35
USB1Q9BQ65 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 AP002981.1-201ENST00000517692 975 ntBASIC12.88□□□□□ -0.35
USB1Q9BQ65 AC044849.1-201ENST00000519737 1188 ntBASIC12.88□□□□□ -0.35
USB1Q9BQ65 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 MTND1P6-201ENST00000523621 946 ntBASIC12.88□□□□□ -0.35
USB1Q9BQ65 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.88□□□□□ -0.35
USB1Q9BQ65 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 AL451050.2-201ENST00000606967 682 ntBASIC12.88□□□□□ -0.35
USB1Q9BQ65 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 AP003072.3-201ENST00000623456 594 ntBASIC12.88□□□□□ -0.35
USB1Q9BQ65 AC009039.2-201ENST00000624524 529 ntBASIC12.88□□□□□ -0.35
USB1Q9BQ65 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 AL805961.1-203ENST00000641078 1258 ntBASIC12.88□□□□□ -0.35
USB1Q9BQ65 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 ACE3P-201ENST00000423435 1973 ntBASIC12.88□□□□□ -0.35
USB1Q9BQ65 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 AC073957.3-201ENST00000609998 6758 ntBASIC12.88□□□□□ -0.35
USB1Q9BQ65 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
USB1Q9BQ65 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.88□□□□□ -0.35
USB1Q9BQ65 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms