Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 Z98885.3-201ENST00000624882 1757 ntBASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 MIR181D-201ENST00000384853 137 ntBASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 SOD1-202ENST00000389995 865 ntTSL 3 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 AC112250.1-201ENST00000504640 745 ntBASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 AC103724.2-201ENST00000520355 476 ntBASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 AC123912.6-201ENST00000612657 315 ntBASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 AC148476.1-201ENST00000622182 705 ntBASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CCDC168Q8NDH2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CCDC168Q8NDH2 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CCDC168Q8NDH2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 EEF1DP2-201ENST00000433698 843 ntBASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 TPT1P11-201ENST00000458482 498 ntBASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 RN7SL87P-201ENST00000497657 288 ntBASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 AC099343.1-201ENST00000513481 609 ntBASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 AC127002.1-201ENST00000619123 455 ntBASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 DNM1P48-201ENST00000419538 439 ntBASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 AC069421.1-201ENST00000447462 323 ntBASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 ALDOAP1-201ENST00000491506 1078 ntBASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 AC104117.4-201ENST00000521486 847 ntBASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 FAM213AP2-201ENST00000521579 683 ntBASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC11.64□□□□□ -0.55
CCDC168Q8NDH2 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CCDC168Q8NDH2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms