Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
CDC42BPAQ5VT25 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 AC135506.1-201ENST00000603877 1799 ntBASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 CR392039.2-201ENST00000623182 509 ntBASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 PXK-210ENST00000479241 2817 ntTSL 2 BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 AC124319.4-201ENST00000622931 2161 ntBASIC20.43■□□□□ 0.86
CDC42BPAQ5VT25 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 RHPN1-AS1-201ENST00000518049 1918 ntBASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 TBC1D3P1-201ENST00000590047 1693 ntBASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 AC024475.2-201ENST00000312173 879 ntBASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 AC022447.5-201ENST00000504817 392 ntBASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 PSME2-217ENST00000615264 874 ntTSL 5 BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 PSME2-218ENST00000630027 185 ntTSL 3 BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 Z97653.2-201ENST00000623057 1418 ntBASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC20.42■□□□□ 0.86
CDC42BPAQ5VT25 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 AC005822.1-201ENST00000414124 1034 ntBASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 RPL18AP15-201ENST00000430258 517 ntBASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 JPT2-214ENST00000569765 782 ntTSL 2 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 AC010601.2-201ENST00000623060 774 ntBASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 COG6-212ENST00000630730 186 ntTSL 5 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 AC111170.3-201ENST00000624282 2464 ntBASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 AL954722.1-201ENST00000431238 259 ntBASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 FAM86JP-202ENST00000484500 988 ntBASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC20.41■□□□□ 0.86
CDC42BPAQ5VT25 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms