Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 AL928654.5-201ENST00000624831 2501 ntBASIC11.44□□□□□ -0.58
LMO4P61968 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 TUBB4AP1-201ENST00000450755 1325 ntBASIC11.44□□□□□ -0.58
LMO4P61968 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.44□□□□□ -0.58
LMO4P61968 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC11.44□□□□□ -0.58
LMO4P61968 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC11.44□□□□□ -0.58
LMO4P61968 SURF4-203ENST00000371991 715 ntTSL 3 BASIC11.44□□□□□ -0.58
LMO4P61968 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC11.44□□□□□ -0.58
LMO4P61968 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
LMO4P61968 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
LMO4P61968 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC11.44□□□□□ -0.58
LMO4P61968 KRT17P4-201ENST00000429445 819 ntBASIC11.44□□□□□ -0.58
LMO4P61968 AK2P2-201ENST00000439142 405 ntBASIC11.44□□□□□ -0.58
LMO4P61968 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC11.44□□□□□ -0.58
LMO4P61968 GULOP-201ENST00000454030 748 ntBASIC11.44□□□□□ -0.58
LMO4P61968 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC11.44□□□□□ -0.58
LMO4P61968 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC11.44□□□□□ -0.58
LMO4P61968 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC11.44□□□□□ -0.58
LMO4P61968 AC010234.1-201ENST00000494599 870 ntBASIC11.44□□□□□ -0.58
LMO4P61968 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC11.44□□□□□ -0.58
LMO4P61968 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC11.44□□□□□ -0.58
LMO4P61968 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC11.44□□□□□ -0.58
LMO4P61968 CYP4F36P-201ENST00000589193 186 ntBASIC11.44□□□□□ -0.58
LMO4P61968 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC11.44□□□□□ -0.58
LMO4P61968 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC11.44□□□□□ -0.58
LMO4P61968 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC11.44□□□□□ -0.58
LMO4P61968 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC11.44□□□□□ -0.58
LMO4P61968 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
LMO4P61968 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
LMO4P61968 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
LMO4P61968 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
LMO4P61968 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
LMO4P61968 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.44□□□□□ -0.58
LMO4P61968 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.44□□□□□ -0.58
LMO4P61968 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC11.44□□□□□ -0.58
LMO4P61968 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 MIR600HG-201ENST00000449175 5984 ntBASIC11.44□□□□□ -0.58
LMO4P61968 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
LMO4P61968 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC11.44□□□□□ -0.58
LMO4P61968 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC11.44□□□□□ -0.58
LMO4P61968 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LMO4P61968 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
LMO4P61968 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC11.44□□□□□ -0.58
LMO4P61968 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
LMO4P61968 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LMO4P61968 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
LMO4P61968 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.43□□□□□ -0.58
LMO4P61968 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LMO4P61968 AL109809.1-201ENST00000418979 1367 ntBASIC11.43□□□□□ -0.58
LMO4P61968 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC11.43□□□□□ -0.58
LMO4P61968 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LMO4P61968 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
LMO4P61968 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
LMO4P61968 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LMO4P61968 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
LMO4P61968 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LMO4P61968 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
LMO4P61968 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
LMO4P61968 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
LMO4P61968 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LMO4P61968 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LMO4P61968 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
LMO4P61968 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LMO4P61968 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LMO4P61968 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LMO4P61968 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LMO4P61968 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
LMO4P61968 MIR1301-201ENST00000408518 82 ntBASIC11.43□□□□□ -0.58
LMO4P61968 OR51A9P-201ENST00000422578 911 ntBASIC11.43□□□□□ -0.58
LMO4P61968 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC11.43□□□□□ -0.58
LMO4P61968 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC11.43□□□□□ -0.58
LMO4P61968 AL139008.1-201ENST00000437894 228 ntBASIC11.43□□□□□ -0.58
LMO4P61968 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
LMO4P61968 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC11.43□□□□□ -0.58
LMO4P61968 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
LMO4P61968 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC11.43□□□□□ -0.58
LMO4P61968 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC11.43□□□□□ -0.58
LMO4P61968 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC11.43□□□□□ -0.58
LMO4P61968 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LMO4P61968 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC11.43□□□□□ -0.58
LMO4P61968 THY1-209ENST00000580275 578 ntTSL 3 BASIC11.43□□□□□ -0.58
LMO4P61968 HKR1-225ENST00000592168 566 ntTSL 4 BASIC11.43□□□□□ -0.58
LMO4P61968 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC11.43□□□□□ -0.58
LMO4P61968 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms