Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SEC61A1P61619 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SEC61A1P61619 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SEC61A1P61619 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SEC61A1P61619 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC61A1P61619 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 BTBD6P1-201ENST00000412176 1267 ntBASIC12.47□□□□□ -0.41
SEC61A1P61619 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC61A1P61619 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.47□□□□□ -0.41
SEC61A1P61619 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 PFN1P12-201ENST00000455938 534 ntBASIC12.47□□□□□ -0.41
SEC61A1P61619 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.47□□□□□ -0.41
SEC61A1P61619 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 AC099548.2-209ENST00000480264 625 ntBASIC12.47□□□□□ -0.41
SEC61A1P61619 MESTP3-201ENST00000503460 968 ntBASIC12.47□□□□□ -0.41
SEC61A1P61619 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.47□□□□□ -0.41
SEC61A1P61619 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.47□□□□□ -0.41
SEC61A1P61619 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC61A1P61619 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SEC61A1P61619 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.47□□□□□ -0.41
SEC61A1P61619 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 MIR4683-201ENST00000579659 81 ntBASIC12.47□□□□□ -0.41
SEC61A1P61619 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 AC243960.2-201ENST00000600996 747 ntBASIC12.47□□□□□ -0.41
SEC61A1P61619 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC61A1P61619 AL118558.3-201ENST00000607414 1079 ntBASIC12.47□□□□□ -0.41
SEC61A1P61619 MIR6074-201ENST00000612054 107 ntBASIC12.47□□□□□ -0.41
SEC61A1P61619 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.47□□□□□ -0.41
SEC61A1P61619 SALL4P5-201ENST00000419001 1760 ntBASIC12.47□□□□□ -0.41
SEC61A1P61619 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC61A1P61619 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SEC61A1P61619 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC61A1P61619 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC61A1P61619 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 CICP1-201ENST00000416803 2410 ntBASIC12.47□□□□□ -0.41
SEC61A1P61619 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC61A1P61619 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SEC61A1P61619 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SEC61A1P61619 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SEC61A1P61619 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SEC61A1P61619 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.46□□□□□ -0.41
SEC61A1P61619 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SEC61A1P61619 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SEC61A1P61619 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.46□□□□□ -0.41
SEC61A1P61619 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.46□□□□□ -0.41
SEC61A1P61619 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 AC090643.2-201ENST00000623442 2029 ntBASIC12.46□□□□□ -0.41
SEC61A1P61619 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SEC61A1P61619 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.46□□□□□ -0.41
SEC61A1P61619 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.46□□□□□ -0.41
SEC61A1P61619 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 HIST2H2BB-201ENST00000449108 381 ntBASIC12.46□□□□□ -0.41
SEC61A1P61619 AC022494.1-201ENST00000466044 728 ntBASIC12.46□□□□□ -0.41
SEC61A1P61619 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.46□□□□□ -0.41
SEC61A1P61619 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.46□□□□□ -0.41
SEC61A1P61619 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SEC61A1P61619 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.46□□□□□ -0.41
SEC61A1P61619 AL096828.3-201ENST00000615354 462 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms