Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.92□□□□□ -0.34
CENPAP49450 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.92□□□□□ -0.34
CENPAP49450 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.92□□□□□ -0.34
CENPAP49450 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.92□□□□□ -0.34
CENPAP49450 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.92□□□□□ -0.34
CENPAP49450 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.92□□□□□ -0.34
CENPAP49450 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.92□□□□□ -0.34
CENPAP49450 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 AL358472.3-201ENST00000608147 415 ntBASIC12.92□□□□□ -0.34
CENPAP49450 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.92□□□□□ -0.34
CENPAP49450 ZACNP1-201ENST00000612259 710 ntBASIC12.92□□□□□ -0.34
CENPAP49450 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.92□□□□□ -0.34
CENPAP49450 IGHV3-72-202ENST00000621503 303 ntBASIC12.92□□□□□ -0.34
CENPAP49450 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.92□□□□□ -0.34
CENPAP49450 AL445209.1-201ENST00000607269 3491 ntBASIC12.92□□□□□ -0.34
CENPAP49450 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.92□□□□□ -0.34
CENPAP49450 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.92□□□□□ -0.34
CENPAP49450 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC12.92□□□□□ -0.34
CENPAP49450 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.92□□□□□ -0.34
CENPAP49450 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CENPAP49450 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.92□□□□□ -0.34
CENPAP49450 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.92□□□□□ -0.34
CENPAP49450 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CENPAP49450 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.92□□□□□ -0.34
CENPAP49450 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CENPAP49450 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CENPAP49450 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC12.91□□□□□ -0.34
CENPAP49450 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.91□□□□□ -0.34
CENPAP49450 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 AL022313.4-201ENST00000562756 2046 ntBASIC12.91□□□□□ -0.34
CENPAP49450 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 AGAP10P-201ENST00000454844 2418 ntBASIC12.91□□□□□ -0.34
CENPAP49450 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.91□□□□□ -0.34
CENPAP49450 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CENPAP49450 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CENPAP49450 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CENPAP49450 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.91□□□□□ -0.34
CENPAP49450 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.91□□□□□ -0.34
CENPAP49450 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CENPAP49450 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.91□□□□□ -0.34
CENPAP49450 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.91□□□□□ -0.34
CENPAP49450 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.91□□□□□ -0.34
CENPAP49450 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.91□□□□□ -0.34
CENPAP49450 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.91□□□□□ -0.34
CENPAP49450 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.91□□□□□ -0.34
CENPAP49450 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.91□□□□□ -0.34
CENPAP49450 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.91□□□□□ -0.34
CENPAP49450 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.91□□□□□ -0.34
CENPAP49450 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.91□□□□□ -0.34
CENPAP49450 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.91□□□□□ -0.34
CENPAP49450 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.91□□□□□ -0.34
CENPAP49450 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.91□□□□□ -0.34
CENPAP49450 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CENPAP49450 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
CENPAP49450 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CENPAP49450 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.91□□□□□ -0.34
CENPAP49450 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CENPAP49450 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.91□□□□□ -0.34
CENPAP49450 AC073548.1-201ENST00000624088 1882 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms