Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC16.1■□□□□ 0.17
CLCN1P35523 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC16.1■□□□□ 0.17
CLCN1P35523 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
CLCN1P35523 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.1■□□□□ 0.17
CLCN1P35523 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.1■□□□□ 0.17
CLCN1P35523 BAP1-211ENST00000615113 489 ntBASIC16.1■□□□□ 0.17
CLCN1P35523 AL603764.1-201ENST00000636452 321 ntBASIC16.1■□□□□ 0.17
CLCN1P35523 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.1■□□□□ 0.17
CLCN1P35523 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLCN1P35523 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC16.1■□□□□ 0.17
CLCN1P35523 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CLCN1P35523 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN1P35523 GUCY2EP-203ENST00000531117 1918 ntBASIC16.09■□□□□ 0.17
CLCN1P35523 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC16.09■□□□□ 0.17
CLCN1P35523 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC16.09■□□□□ 0.17
CLCN1P35523 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC16.09■□□□□ 0.17
CLCN1P35523 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC16.09■□□□□ 0.17
CLCN1P35523 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLCN1P35523 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC16.09■□□□□ 0.17
CLCN1P35523 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CLCN1P35523 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CLCN1P35523 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.09■□□□□ 0.17
CLCN1P35523 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.09■□□□□ 0.17
CLCN1P35523 AC138761.1-201ENST00000584393 385 ntBASIC16.09■□□□□ 0.17
CLCN1P35523 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.09■□□□□ 0.17
CLCN1P35523 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CLCN1P35523 AC092364.2-202ENST00000597012 1073 ntBASIC16.09■□□□□ 0.17
CLCN1P35523 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.09■□□□□ 0.17
CLCN1P35523 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC16.09■□□□□ 0.17
CLCN1P35523 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 AC010969.2-201ENST00000602458 3231 ntBASIC16.09■□□□□ 0.17
CLCN1P35523 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLCN1P35523 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLCN1P35523 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 LRRC59-203ENST00000576448 1531 ntBASIC16.09■□□□□ 0.17
CLCN1P35523 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC16.09■□□□□ 0.17
CLCN1P35523 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC16.09■□□□□ 0.17
CLCN1P35523 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN1P35523 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CLCN1P35523 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CLCN1P35523 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLCN1P35523 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CLCN1P35523 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC16.08■□□□□ 0.17
CLCN1P35523 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLCN1P35523 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLCN1P35523 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLCN1P35523 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLCN1P35523 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLCN1P35523 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLCN1P35523 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CLCN1P35523 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLCN1P35523 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLCN1P35523 NTM-206ENST00000427481 2583 ntTSL 5 BASIC16.08■□□□□ 0.17
CLCN1P35523 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms