Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CFTRP13569 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CFTRP13569 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC23.06■■□□□ 1.28
CFTRP13569 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CFTRP13569 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC23.05■■□□□ 1.28
CFTRP13569 AC104117.1-201ENST00000517817 900 ntBASIC23.05■■□□□ 1.28
CFTRP13569 FOS-205ENST00000555242 629 ntTSL 2 BASIC23.05■■□□□ 1.28
CFTRP13569 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC23.05■■□□□ 1.28
CFTRP13569 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC23.05■■□□□ 1.28
CFTRP13569 ALOX12P1-201ENST00000579299 1229 ntBASIC23.05■■□□□ 1.28
CFTRP13569 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CFTRP13569 AL117379.1-201ENST00000619319 677 ntBASIC23.05■■□□□ 1.28
CFTRP13569 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC23.05■■□□□ 1.28
CFTRP13569 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CFTRP13569 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CFTRP13569 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CFTRP13569 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
CFTRP13569 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CFTRP13569 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CFTRP13569 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CFTRP13569 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CFTRP13569 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CFTRP13569 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CFTRP13569 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CFTRP13569 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC23.05■■□□□ 1.28
CFTRP13569 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC23.05■■□□□ 1.28
CFTRP13569 HNRNPA1P68-201ENST00000425806 979 ntBASIC23.05■■□□□ 1.28
CFTRP13569 AC139143.1-201ENST00000441772 1207 ntBASIC23.05■■□□□ 1.28
CFTRP13569 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC23.05■■□□□ 1.28
CFTRP13569 MYL6-210ENST00000548400 573 ntTSL 3 BASIC23.05■■□□□ 1.28
CFTRP13569 AL589743.3-201ENST00000604121 517 ntBASIC23.05■■□□□ 1.28
CFTRP13569 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CFTRP13569 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CFTRP13569 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CFTRP13569 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CFTRP13569 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CFTRP13569 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CFTRP13569 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
CFTRP13569 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CFTRP13569 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC23.04■■□□□ 1.28
CFTRP13569 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CFTRP13569 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC23.04■■□□□ 1.28
CFTRP13569 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CFTRP13569 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
CFTRP13569 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CFTRP13569 OR2T32P-201ENST00000403423 963 ntBASIC23.04■■□□□ 1.28
CFTRP13569 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC23.04■■□□□ 1.28
CFTRP13569 AC012066.1-201ENST00000439252 694 ntBASIC23.04■■□□□ 1.28
CFTRP13569 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC23.04■■□□□ 1.28
CFTRP13569 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CFTRP13569 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC23.04■■□□□ 1.28
CFTRP13569 AC007622.1-201ENST00000488371 535 ntBASIC23.04■■□□□ 1.28
CFTRP13569 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CFTRP13569 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC23.04■■□□□ 1.28
CFTRP13569 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC23.04■■□□□ 1.28
CFTRP13569 MFSD12-215ENST00000615613 688 ntBASIC23.04■■□□□ 1.28
CFTRP13569 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CFTRP13569 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CFTRP13569 AC132872.4-202ENST00000622924 2756 ntBASIC23.04■■□□□ 1.28
CFTRP13569 TCAM1P-207ENST00000485295 1537 ntBASIC23.03■■□□□ 1.28
CFTRP13569 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CFTRP13569 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC23.03■■□□□ 1.28
CFTRP13569 ACE-204ENST00000428043 5120 ntTSL 2 BASIC23.03■■□□□ 1.28
CFTRP13569 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CFTRP13569 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CFTRP13569 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CFTRP13569 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CFTRP13569 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CFTRP13569 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CFTRP13569 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC23.03■■□□□ 1.28
CFTRP13569 PHBP3-201ENST00000412562 819 ntBASIC23.03■■□□□ 1.28
CFTRP13569 AC000078.1-201ENST00000420617 682 ntBASIC23.03■■□□□ 1.28
CFTRP13569 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC23.03■■□□□ 1.28
CFTRP13569 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC23.03■■□□□ 1.28
CFTRP13569 FAM223B-202ENST00000598177 713 ntBASIC23.03■■□□□ 1.28
CFTRP13569 FAM223A-202ENST00000625204 713 ntBASIC23.03■■□□□ 1.28
CFTRP13569 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC23.03■■□□□ 1.28
CFTRP13569 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC23.03■■□□□ 1.28
CFTRP13569 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CFTRP13569 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC23.03■■□□□ 1.28
CFTRP13569 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CFTRP13569 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFTRP13569 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
CFTRP13569 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CFTRP13569 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CFTRP13569 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFTRP13569 KRT18P45-201ENST00000515347 1333 ntBASIC23.02■■□□□ 1.28
CFTRP13569 HTR7P1-202ENST00000624664 4411 ntBASIC23.02■■□□□ 1.28
CFTRP13569 HYMAI-201ENST00000635591 3347 ntBASIC23.02■■□□□ 1.28
CFTRP13569 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC23.02■■□□□ 1.28
CFTRP13569 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC23.02■■□□□ 1.28
CFTRP13569 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFTRP13569 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC23.02■■□□□ 1.28
CFTRP13569 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CFTRP13569 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC23.02■■□□□ 1.28
CFTRP13569 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CFTRP13569 RPS6-201ENST00000315377 863 ntTSL 3 BASIC23.02■■□□□ 1.28
CFTRP13569 RBPMSLP-201ENST00000433427 502 ntBASIC23.02■■□□□ 1.28
CFTRP13569 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC23.02■■□□□ 1.28
CFTRP13569 AC114781.1-201ENST00000450559 1028 ntBASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms