Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.74□□□□□ -0.21
KRT6AP02538 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.74□□□□□ -0.21
KRT6AP02538 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.74□□□□□ -0.21
KRT6AP02538 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
KRT6AP02538 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.74□□□□□ -0.21
KRT6AP02538 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRT6AP02538 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
KRT6AP02538 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
KRT6AP02538 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.73□□□□□ -0.21
KRT6AP02538 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.73□□□□□ -0.21
KRT6AP02538 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
KRT6AP02538 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
KRT6AP02538 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.73□□□□□ -0.21
KRT6AP02538 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
KRT6AP02538 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.73□□□□□ -0.21
KRT6AP02538 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
KRT6AP02538 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
KRT6AP02538 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.73□□□□□ -0.21
KRT6AP02538 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.73□□□□□ -0.21
KRT6AP02538 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.73□□□□□ -0.21
KRT6AP02538 FAM21FP-201ENST00000426241 1131 ntBASIC13.73□□□□□ -0.21
KRT6AP02538 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.73□□□□□ -0.21
KRT6AP02538 U91328.1-201ENST00000437528 223 ntBASIC13.73□□□□□ -0.21
KRT6AP02538 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.73□□□□□ -0.21
KRT6AP02538 HSPB1P2-201ENST00000448722 546 ntBASIC13.73□□□□□ -0.21
KRT6AP02538 Z93015.1-201ENST00000451718 390 ntBASIC13.73□□□□□ -0.21
KRT6AP02538 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.73□□□□□ -0.21
KRT6AP02538 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 SCARNA21-201ENST00000517026 139 ntBASIC13.73□□□□□ -0.21
KRT6AP02538 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.73□□□□□ -0.21
KRT6AP02538 SNX29P1-201ENST00000548357 1007 ntBASIC13.73□□□□□ -0.21
KRT6AP02538 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.73□□□□□ -0.21
KRT6AP02538 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.73□□□□□ -0.21
KRT6AP02538 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
KRT6AP02538 AC010328.2-201ENST00000597698 1111 ntBASIC13.73□□□□□ -0.21
KRT6AP02538 AC133552.6-201ENST00000613406 534 ntBASIC13.73□□□□□ -0.21
KRT6AP02538 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.73□□□□□ -0.21
KRT6AP02538 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
KRT6AP02538 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
KRT6AP02538 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.73□□□□□ -0.21
KRT6AP02538 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.73□□□□□ -0.21
KRT6AP02538 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.73□□□□□ -0.21
KRT6AP02538 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
KRT6AP02538 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
KRT6AP02538 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.72□□□□□ -0.21
KRT6AP02538 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
KRT6AP02538 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
KRT6AP02538 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.72□□□□□ -0.21
KRT6AP02538 LINC00115-201ENST00000473798 1317 ntBASIC13.72□□□□□ -0.21
KRT6AP02538 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
KRT6AP02538 AP002353.1-201ENST00000528257 1599 ntBASIC13.72□□□□□ -0.21
KRT6AP02538 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.72□□□□□ -0.21
KRT6AP02538 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.72□□□□□ -0.21
KRT6AP02538 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.72□□□□□ -0.21
KRT6AP02538 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRT6AP02538 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
KRT6AP02538 POM121L10P-201ENST00000436994 1285 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms