Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 AC016397.2-201ENST00000624848 1985 ntBASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 USP17L6P-201ENST00000382470 1197 ntBASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 NDUFS6P1-201ENST00000485187 316 ntBASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 MIR4750-201ENST00000584564 56 ntBASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 AC009560.1-201ENST00000620208 434 ntBASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NPIPA3F8WFD2 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 BRD7P5-201ENST00000299197 1822 ntBASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 RN7SL81P-201ENST00000493781 261 ntBASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 PCDHA5-203ENST00000614258 4248 ntBASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NPIPA3F8WFD2 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms