Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NCDNQ9UBB6 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NCDNQ9UBB6 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 AC026748.1-201ENST00000624349 3251 ntBASIC13.96□□□□□ -0.17
NCDNQ9UBB6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 AC232323.1-201ENST00000540724 2099 ntBASIC13.96□□□□□ -0.17
NCDNQ9UBB6 AC007952.5-201ENST00000572818 1486 ntBASIC13.96□□□□□ -0.17
NCDNQ9UBB6 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 AC022080.1-201ENST00000366255 781 ntBASIC13.96□□□□□ -0.17
NCDNQ9UBB6 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 EEF1DP7-201ENST00000580496 513 ntBASIC13.96□□□□□ -0.17
NCDNQ9UBB6 MIR4265-201ENST00000582152 99 ntBASIC13.96□□□□□ -0.17
NCDNQ9UBB6 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCDNQ9UBB6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NCDNQ9UBB6 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.96□□□□□ -0.18
NCDNQ9UBB6 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NCDNQ9UBB6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
NCDNQ9UBB6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NCDNQ9UBB6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
NCDNQ9UBB6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
NCDNQ9UBB6 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
NCDNQ9UBB6 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
NCDNQ9UBB6 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
NCDNQ9UBB6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
NCDNQ9UBB6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NCDNQ9UBB6 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.96□□□□□ -0.18
NCDNQ9UBB6 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NCDNQ9UBB6 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NCDNQ9UBB6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 LINC00552-201ENST00000625151 2579 ntBASIC13.95□□□□□ -0.18
NCDNQ9UBB6 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 AC067931.2-201ENST00000623655 2003 ntBASIC13.95□□□□□ -0.18
NCDNQ9UBB6 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 HDGF-202ENST00000368206 960 ntTSL 5 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 AC093300.1-201ENST00000510368 1201 ntBASIC13.95□□□□□ -0.18
NCDNQ9UBB6 ISL1-203ENST00000511384 981 ntTSL 5 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 BMF-206ENST00000558774 671 ntTSL 3 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 AC079414.2-201ENST00000567157 1104 ntBASIC13.95□□□□□ -0.18
NCDNQ9UBB6 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC13.95□□□□□ -0.18
NCDNQ9UBB6 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC13.95□□□□□ -0.18
NCDNQ9UBB6 PSME2-217ENST00000615264 874 ntTSL 5 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC13.95□□□□□ -0.18
NCDNQ9UBB6 AC091769.1-201ENST00000619576 568 ntBASIC13.95□□□□□ -0.18
NCDNQ9UBB6 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 AC048382.6-201ENST00000621980 1223 ntBASIC13.95□□□□□ -0.18
NCDNQ9UBB6 PSME2-218ENST00000630027 185 ntTSL 3 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 AC007686.3-201ENST00000619017 3487 ntBASIC13.95□□□□□ -0.18
NCDNQ9UBB6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 231 ms