Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 AC111170.3-201ENST00000624282 2464 ntBASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 FRMPD2B-201ENST00000431305 1347 ntBASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 AC103798.2-201ENST00000624292 632 ntBASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 AL928654.5-201ENST00000624831 2501 ntBASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CUEDC1Q9NWM3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 SEC63P1-201ENST00000425785 1258 ntBASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 AC073150.1-201ENST00000450406 1084 ntBASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 KRT18P15-201ENST00000458108 1291 ntBASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 COA4-204ENST00000541455 1038 ntTSL 5 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 AC018635.2-201ENST00000608625 364 ntBASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CUEDC1Q9NWM3 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 CR383656.2-201ENST00000548656 2254 ntBASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms