Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 BCRP2-202ENST00000447763 634 ntBASIC12.17□□□□□ -0.46
NICN1Q9BSH3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 BCRP6-201ENST00000510112 632 ntBASIC12.17□□□□□ -0.46
NICN1Q9BSH3 BCRP7-201ENST00000511549 544 ntBASIC12.17□□□□□ -0.46
NICN1Q9BSH3 AC078819.1-201ENST00000547454 765 ntBASIC12.17□□□□□ -0.46
NICN1Q9BSH3 AC012085.1-201ENST00000548270 765 ntBASIC12.17□□□□□ -0.46
NICN1Q9BSH3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 AP000437.1-201ENST00000624057 2085 ntBASIC12.17□□□□□ -0.46
NICN1Q9BSH3 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NICN1Q9BSH3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 AL031719.1-201ENST00000623365 2587 ntBASIC12.16□□□□□ -0.46
NICN1Q9BSH3 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 AC005229.1-201ENST00000392885 409 ntBASIC12.16□□□□□ -0.46
NICN1Q9BSH3 AC092933.1-201ENST00000393644 945 ntBASIC12.16□□□□□ -0.46
NICN1Q9BSH3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 AL645933.1-201ENST00000440087 609 ntBASIC12.16□□□□□ -0.46
NICN1Q9BSH3 ST13P19-201ENST00000442505 1124 ntBASIC12.16□□□□□ -0.46
NICN1Q9BSH3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 AC021016.3-201ENST00000608367 477 ntBASIC12.16□□□□□ -0.46
NICN1Q9BSH3 AC244669.2-201ENST00000612320 853 ntBASIC12.16□□□□□ -0.46
NICN1Q9BSH3 AC138951.2-201ENST00000623455 1161 ntBASIC12.16□□□□□ -0.46
NICN1Q9BSH3 AC006453.4-201ENST00000636949 1252 ntBASIC12.16□□□□□ -0.46
NICN1Q9BSH3 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NICN1Q9BSH3 MAPK10-262ENST00000641051 5738 ntBASIC12.16□□□□□ -0.46
NICN1Q9BSH3 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NICN1Q9BSH3 AC061965.1-201ENST00000560524 1465 ntBASIC12.15□□□□□ -0.46
NICN1Q9BSH3 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms