Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FYCO1Q9BQS8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC21.21■□□□□ 0.99
FYCO1Q9BQS8 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FYCO1Q9BQS8 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FYCO1Q9BQS8 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
FYCO1Q9BQS8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
FYCO1Q9BQS8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
FYCO1Q9BQS8 CR383656.2-201ENST00000548656 2254 ntBASIC21.2■□□□□ 0.99
FYCO1Q9BQS8 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 HSD3BP1-201ENST00000286193 1111 ntBASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 RPL35P1-201ENST00000450819 370 ntBASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 AC004801.1-201ENST00000549557 360 ntBASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 AL590235.1-201ENST00000564650 861 ntBASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 AC091304.3-201ENST00000566500 716 ntBASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 AL358781.1-202ENST00000321081 1360 ntBASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 SRL-202ENST00000537996 1814 ntTSL 2 BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 GH1-203ENST00000351388 685 ntTSL 2 BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 AC113347.2-201ENST00000512350 279 ntBASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 HNRNPA1P16-201ENST00000575692 955 ntBASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FYCO1Q9BQS8 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 USP28-214ENST00000545540 3431 ntTSL 2 BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 U73169.1-201ENST00000395152 367 ntBASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 AC048382.6-201ENST00000621980 1223 ntBASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC21.19■□□□□ 0.98
FYCO1Q9BQS8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 SOD2-205ENST00000444946 917 ntTSL 2 BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 PSME2P2-201ENST00000453033 700 ntBASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 AC093700.1-201ENST00000503348 717 ntBASIC21.18■□□□□ 0.98
FYCO1Q9BQS8 AC010202.1-201ENST00000551181 405 ntBASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms