Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 RPL13AP20-201ENST00000459725 609 ntBASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 KRT18P8-201ENST00000581937 1246 ntBASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 TCAF1P1-201ENST00000414990 2232 ntBASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 AC135782.3-201ENST00000562782 2105 ntBASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 AC004899.1-201ENST00000424687 1714 ntBASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 BTBD6P1-201ENST00000412176 1267 ntBASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 MIR6805-201ENST00000615055 62 ntBASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 AC068760.1-201ENST00000493579 1953 ntBASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 FAM90A7P-201ENST00000382628 1395 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms