Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MBL3P-201ENST00000402234 644 ntBASIC8.38□□□□□ -1.07
APOBP04114 MRPS16P3-201ENST00000415961 374 ntBASIC8.38□□□□□ -1.07
APOBP04114 TUBB8P9-201ENST00000422534 1276 ntBASIC8.38□□□□□ -1.07
APOBP04114 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC8.38□□□□□ -1.07
APOBP04114 TUBB8P10-201ENST00000430210 1279 ntBASIC8.38□□□□□ -1.07
APOBP04114 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC8.38□□□□□ -1.07
APOBP04114 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC8.38□□□□□ -1.07
APOBP04114 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC8.38□□□□□ -1.07
APOBP04114 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC8.38□□□□□ -1.07
APOBP04114 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC8.38□□□□□ -1.07
APOBP04114 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC8.38□□□□□ -1.07
APOBP04114 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
APOBP04114 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 AHCYP7-201ENST00000560847 1308 ntBASIC8.38□□□□□ -1.07
APOBP04114 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 TPM3P7-201ENST00000338274 732 ntBASIC8.37□□□□□ -1.07
APOBP04114 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 IGHVII-33-1-201ENST00000524010 280 ntBASIC8.37□□□□□ -1.07
APOBP04114 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 BCAR1P1-201ENST00000553953 636 ntBASIC8.37□□□□□ -1.07
APOBP04114 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 AC080038.2-201ENST00000617734 423 ntBASIC8.37□□□□□ -1.07
APOBP04114 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 AL157996.1-201ENST00000624684 2299 ntBASIC8.37□□□□□ -1.07
APOBP04114 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 TUSC8-201ENST00000432701 978 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC8.37□□□□□ -1.07
APOBP04114 GAPDHP76-201ENST00000512278 976 ntBASIC8.37□□□□□ -1.07
APOBP04114 DNM1P50-201ENST00000565767 508 ntBASIC8.37□□□□□ -1.07
APOBP04114 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC8.37□□□□□ -1.07
APOBP04114 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC8.37□□□□□ -1.07
APOBP04114 AC005336.1-201ENST00000585431 1243 ntBASIC8.37□□□□□ -1.07
APOBP04114 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 AL117379.1-201ENST00000619319 677 ntBASIC8.37□□□□□ -1.07
APOBP04114 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 MST1P2-201ENST00000457982 2291 ntBASIC8.37□□□□□ -1.07
APOBP04114 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 TUBAP-201ENST00000425085 1352 ntBASIC8.37□□□□□ -1.07
APOBP04114 GSN-203ENST00000373808 2664 ntTSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC8.37□□□□□ -1.07
APOBP04114 AP000343.1-201ENST00000440602 385 ntBASIC8.37□□□□□ -1.07
APOBP04114 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC8.37□□□□□ -1.07
APOBP04114 TCP10L-202ENST00000472557 732 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC8.37□□□□□ -1.07
APOBP04114 AL031058.1-201ENST00000561592 888 ntBASIC8.37□□□□□ -1.07
APOBP04114 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 CICP24-201ENST00000605464 2705 ntBASIC8.37□□□□□ -1.07
APOBP04114 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
APOBP04114 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
APOBP04114 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 COQ4-202ENST00000372875 928 ntTSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 HBD-202ENST00000380299 785 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC8.37□□□□□ -1.07
APOBP04114 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms