Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF2Q9HAU5 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 OS9-206ENST00000435406 2346 ntTSL 2 BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 AC073862.5-201ENST00000624129 2027 ntBASIC17.42■□□□□ 0.38
UPF2Q9HAU5 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 FAM8A4P-201ENST00000435433 1213 ntBASIC17.42■□□□□ 0.38
UPF2Q9HAU5 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 AL512310.5-201ENST00000551999 515 ntBASIC17.42■□□□□ 0.38
UPF2Q9HAU5 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 AC004233.3-201ENST00000607794 1269 ntBASIC17.42■□□□□ 0.38
UPF2Q9HAU5 WFDC1-204ENST00000613603 549 ntBASIC17.42■□□□□ 0.38
UPF2Q9HAU5 AC106028.4-201ENST00000614509 607 ntBASIC17.42■□□□□ 0.38
UPF2Q9HAU5 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.42■□□□□ 0.38
UPF2Q9HAU5 Z98257.2-202ENST00000641138 1548 ntBASIC17.42■□□□□ 0.38
UPF2Q9HAU5 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 HMGA1P1-201ENST00000415560 1062 ntBASIC17.41■□□□□ 0.38
UPF2Q9HAU5 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 RNA5SP421-201ENST00000516864 134 ntBASIC17.41■□□□□ 0.38
UPF2Q9HAU5 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 AC132938.4-201ENST00000623835 848 ntBASIC17.41■□□□□ 0.38
UPF2Q9HAU5 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 AL033527.5-201ENST00000641382 801 ntBASIC17.41■□□□□ 0.38
UPF2Q9HAU5 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 RCC2P1-201ENST00000452257 1476 ntBASIC17.41■□□□□ 0.38
UPF2Q9HAU5 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms