Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 AC004899.1-201ENST00000424687 1714 ntBASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC16.92■□□□□ 0.3
UPF3BQ9BZI7 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 KRT8P29-201ENST00000420409 1371 ntBASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 NUTM2HP-201ENST00000442076 2498 ntBASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 HLA-J-204ENST00000495278 958 ntBASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 AC108725.1-201ENST00000495472 409 ntBASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 FAM86HP-204ENST00000513466 959 ntBASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 AC140658.4-201ENST00000561990 352 ntBASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 AC243960.2-201ENST00000600996 747 ntBASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 AC004899.2-201ENST00000622993 3860 ntBASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 AHCYP4-201ENST00000419201 1315 ntBASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
UPF3BQ9BZI7 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 AL445250.1-201ENST00000641671 2259 ntBASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 AC103592.1-201ENST00000394513 664 ntBASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 GPAA1P2-201ENST00000417923 928 ntBASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 TUBB8P8-201ENST00000458717 1058 ntBASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 RN7SL560P-201ENST00000577943 264 ntBASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 KRT18P8-201ENST00000581937 1246 ntBASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 AC106872.11-201ENST00000605838 421 ntBASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 AC022748.3-201ENST00000621828 275 ntBASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 AC061965.1-201ENST00000560524 1465 ntBASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 LINC00638-201ENST00000555578 2518 ntBASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
UPF3BQ9BZI7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
UPF3BQ9BZI7 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
UPF3BQ9BZI7 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
UPF3BQ9BZI7 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms