Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
VGLL1Q99990 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC10.81□□□□□ -0.68
VGLL1Q99990 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
VGLL1Q99990 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC10.81□□□□□ -0.68
VGLL1Q99990 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC10.81□□□□□ -0.68
VGLL1Q99990 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
VGLL1Q99990 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC10.81□□□□□ -0.68
VGLL1Q99990 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
VGLL1Q99990 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC10.81□□□□□ -0.68
VGLL1Q99990 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
VGLL1Q99990 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VGLL1Q99990 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC10.8□□□□□ -0.68
VGLL1Q99990 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
VGLL1Q99990 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC10.8□□□□□ -0.68
VGLL1Q99990 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC10.8□□□□□ -0.68
VGLL1Q99990 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
VGLL1Q99990 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC10.8□□□□□ -0.68
VGLL1Q99990 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC10.8□□□□□ -0.68
VGLL1Q99990 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 CARS-214ENST00000529772 2637 ntTSL 2 BASIC10.8□□□□□ -0.68
VGLL1Q99990 USP39-207ENST00000450066 2086 ntTSL 2 BASIC10.8□□□□□ -0.68
VGLL1Q99990 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
VGLL1Q99990 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
VGLL1Q99990 FTO-214ENST00000636218 2227 ntTSL 5 BASIC10.8□□□□□ -0.68
VGLL1Q99990 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
VGLL1Q99990 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC10.8□□□□□ -0.68
VGLL1Q99990 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC10.8□□□□□ -0.68
VGLL1Q99990 COX5BP1-201ENST00000507622 393 ntBASIC10.8□□□□□ -0.68
VGLL1Q99990 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC10.8□□□□□ -0.68
VGLL1Q99990 COQ6-210ENST00000554920 649 ntTSL 3 BASIC10.8□□□□□ -0.68
VGLL1Q99990 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC10.8□□□□□ -0.68
VGLL1Q99990 RN7SL713P-201ENST00000582127 302 ntBASIC10.8□□□□□ -0.68
VGLL1Q99990 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
VGLL1Q99990 AC008825.2-201ENST00000603374 718 ntBASIC10.8□□□□□ -0.68
VGLL1Q99990 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC10.8□□□□□ -0.68
VGLL1Q99990 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC10.8□□□□□ -0.68
VGLL1Q99990 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC10.8□□□□□ -0.68
VGLL1Q99990 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
VGLL1Q99990 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 MAPK10-262ENST00000641051 5738 ntBASIC10.8□□□□□ -0.68
VGLL1Q99990 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC10.8□□□□□ -0.68
VGLL1Q99990 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
VGLL1Q99990 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
VGLL1Q99990 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
VGLL1Q99990 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC10.79□□□□□ -0.68
VGLL1Q99990 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 TP73-207ENST00000378290 1831 ntTSL 2 BASIC10.79□□□□□ -0.68
VGLL1Q99990 AL354989.2-201ENST00000435838 1540 ntBASIC10.79□□□□□ -0.68
VGLL1Q99990 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
VGLL1Q99990 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
VGLL1Q99990 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
VGLL1Q99990 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC10.79□□□□□ -0.68
VGLL1Q99990 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC10.79□□□□□ -0.68
VGLL1Q99990 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC10.79□□□□□ -0.68
VGLL1Q99990 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VGLL1Q99990 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms