Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.35□□□□□ -0.11
SEMA3CQ99985 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.35□□□□□ -0.11
SEMA3CQ99985 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEMA3CQ99985 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEMA3CQ99985 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEMA3CQ99985 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SEMA3CQ99985 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEMA3CQ99985 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEMA3CQ99985 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEMA3CQ99985 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 AC026320.2-201ENST00000434379 478 ntBASIC14.34□□□□□ -0.11
SEMA3CQ99985 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 AL353637.1-201ENST00000451571 732 ntBASIC14.34□□□□□ -0.11
SEMA3CQ99985 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SEMA3CQ99985 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 AC008723.1-201ENST00000506922 207 ntBASIC14.34□□□□□ -0.11
SEMA3CQ99985 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEMA3CQ99985 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 AC091812.3-201ENST00000621362 345 ntBASIC14.34□□□□□ -0.11
SEMA3CQ99985 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SEMA3CQ99985 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEMA3CQ99985 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEMA3CQ99985 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEMA3CQ99985 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEMA3CQ99985 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEMA3CQ99985 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEMA3CQ99985 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEMA3CQ99985 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEMA3CQ99985 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SEMA3CQ99985 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SEMA3CQ99985 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.33□□□□□ -0.11
SEMA3CQ99985 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SEMA3CQ99985 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SEMA3CQ99985 AC104581.4-201ENST00000623126 3052 ntBASIC14.33□□□□□ -0.11
SEMA3CQ99985 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.33□□□□□ -0.11
SEMA3CQ99985 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.33□□□□□ -0.11
SEMA3CQ99985 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 AC130686.1-201ENST00000622936 2466 ntBASIC14.33□□□□□ -0.12
SEMA3CQ99985 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 IGF1-203ENST00000392904 761 ntTSL 5 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 AC073869.2-201ENST00000417338 1026 ntBASIC14.33□□□□□ -0.12
SEMA3CQ99985 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 AC026803.1-201ENST00000569130 274 ntBASIC14.33□□□□□ -0.12
SEMA3CQ99985 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 RN7SL455P-201ENST00000580629 282 ntBASIC14.33□□□□□ -0.12
SEMA3CQ99985 RN7SL574P-201ENST00000581512 297 ntBASIC14.33□□□□□ -0.12
SEMA3CQ99985 MIR4754-201ENST00000582477 89 ntBASIC14.33□□□□□ -0.12
SEMA3CQ99985 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 AL021707.6-201ENST00000609212 491 ntBASIC14.33□□□□□ -0.12
SEMA3CQ99985 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 CU633904.3-201ENST00000624042 1029 ntBASIC14.33□□□□□ -0.12
SEMA3CQ99985 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.33□□□□□ -0.12
SEMA3CQ99985 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA3CQ99985 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms