Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 AL121753.2-201ENST00000624581 1461 ntBASIC15.23■□□□□ 0.03
LRCH3Q96II8 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 RN7SL788P-201ENST00000460504 316 ntBASIC15.23■□□□□ 0.03
LRCH3Q96II8 RN7SL351P-201ENST00000469306 248 ntBASIC15.23■□□□□ 0.03
LRCH3Q96II8 PRSS3P1-201ENST00000503996 742 ntBASIC15.23■□□□□ 0.03
LRCH3Q96II8 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRCH3Q96II8 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
LRCH3Q96II8 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.22■□□□□ 0.03
LRCH3Q96II8 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.22■□□□□ 0.03
LRCH3Q96II8 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRCH3Q96II8 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LRCH3Q96II8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LRCH3Q96II8 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC15.22■□□□□ 0.03
LRCH3Q96II8 RHOC-205ENST00000369636 786 ntTSL 2 BASIC15.22■□□□□ 0.03
LRCH3Q96II8 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRCH3Q96II8 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC15.22■□□□□ 0.03
LRCH3Q96II8 AC133141.1-201ENST00000443015 339 ntBASIC15.22■□□□□ 0.03
LRCH3Q96II8 HNRNPA1P10-201ENST00000444945 962 ntBASIC15.22■□□□□ 0.03
LRCH3Q96II8 NALT1-202ENST00000450304 437 ntTSL 3 BASIC15.22■□□□□ 0.03
LRCH3Q96II8 RNU1-80P-201ENST00000459500 161 ntBASIC15.22■□□□□ 0.03
LRCH3Q96II8 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC15.22■□□□□ 0.03
LRCH3Q96II8 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC15.22■□□□□ 0.03
LRCH3Q96II8 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC15.22■□□□□ 0.03
LRCH3Q96II8 AC106782.5-201ENST00000616011 337 ntBASIC15.22■□□□□ 0.03
LRCH3Q96II8 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC15.22■□□□□ 0.03
LRCH3Q96II8 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LRCH3Q96II8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRCH3Q96II8 LILRP2-202ENST00000413572 1383 ntBASIC15.22■□□□□ 0.03
LRCH3Q96II8 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 AC068587.6-202ENST00000641839 5619 ntBASIC15.22■□□□□ 0.03
LRCH3Q96II8 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRCH3Q96II8 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.21■□□□□ 0.03
LRCH3Q96II8 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH3Q96II8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
LRCH3Q96II8 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH3Q96II8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.21■□□□□ 0.03
LRCH3Q96II8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LRCH3Q96II8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH3Q96II8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.21■□□□□ 0.03
LRCH3Q96II8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRCH3Q96II8 AC009093.10-201ENST00000641956 1442 ntBASIC15.21■□□□□ 0.03
LRCH3Q96II8 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms