Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00346Q8IVM7 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 AP002353.1-201ENST00000528257 1599 ntBASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 KRT18P15-201ENST00000458108 1291 ntBASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 TUBB8P8-201ENST00000458717 1058 ntBASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 IGHV3-71-201ENST00000523324 359 ntBASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 RN7SL560P-201ENST00000577943 264 ntBASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 AL096828.3-201ENST00000615354 462 ntBASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 AL137784.3-201ENST00000623858 2288 ntBASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 AL590824.1-201ENST00000403828 1349 ntBASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 AHCYP4-201ENST00000419201 1315 ntBASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 KRT8P29-201ENST00000420409 1371 ntBASIC12.56□□□□□ -0.4
LINC00346Q8IVM7 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 AC061965.1-201ENST00000560524 1465 ntBASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 VDAC1P1-201ENST00000439229 848 ntBASIC12.55□□□□□ -0.4
LINC00346Q8IVM7 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms