Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RPL39P62891 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC10.05□□□□□ -0.8
RPL39P62891 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
RPL39P62891 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC10.04□□□□□ -0.8
RPL39P62891 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC10.04□□□□□ -0.8
RPL39P62891 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC10.04□□□□□ -0.8
RPL39P62891 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC10.04□□□□□ -0.8
RPL39P62891 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 HNRNPA1P48-201ENST00000562726 1377 ntBASIC10.04□□□□□ -0.8
RPL39P62891 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
RPL39P62891 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 AGGF1P10-201ENST00000635005 2191 ntBASIC10.04□□□□□ -0.8
RPL39P62891 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
RPL39P62891 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC10.04□□□□□ -0.8
RPL39P62891 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
RPL39P62891 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 ACKR1-201ENST00000368121 1240 ntBASIC10.04□□□□□ -0.8
RPL39P62891 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
RPL39P62891 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 PTPA-215ENST00000432124 567 ntTSL 4 BASIC10.04□□□□□ -0.8
RPL39P62891 PNKD-204ENST00000436005 978 ntTSL 5 BASIC10.04□□□□□ -0.8
RPL39P62891 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC10.04□□□□□ -0.8
RPL39P62891 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC10.04□□□□□ -0.8
RPL39P62891 AC055876.2-201ENST00000531834 546 ntBASIC10.04□□□□□ -0.8
RPL39P62891 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 AC092552.1-201ENST00000547243 906 ntBASIC10.04□□□□□ -0.8
RPL39P62891 DUX4L27-201ENST00000554796 1261 ntBASIC10.04□□□□□ -0.8
RPL39P62891 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC10.04□□□□□ -0.8
RPL39P62891 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC10.04□□□□□ -0.8
RPL39P62891 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
RPL39P62891 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC10.04□□□□□ -0.8
RPL39P62891 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC10.04□□□□□ -0.8
RPL39P62891 ENPP7P14-201ENST00000621765 1040 ntBASIC10.04□□□□□ -0.8
RPL39P62891 CR392039.2-201ENST00000623182 509 ntBASIC10.04□□□□□ -0.8
RPL39P62891 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC10.04□□□□□ -0.8
RPL39P62891 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC10.04□□□□□ -0.8
RPL39P62891 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
RPL39P62891 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC10.04□□□□□ -0.8
RPL39P62891 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
RPL39P62891 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC10.04□□□□□ -0.8
RPL39P62891 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
RPL39P62891 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
RPL39P62891 AC092117.1-201ENST00000621230 3250 ntBASIC10.04□□□□□ -0.8
RPL39P62891 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
RPL39P62891 TUBB4AP1-201ENST00000450755 1325 ntBASIC10.04□□□□□ -0.8
RPL39P62891 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
RPL39P62891 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
RPL39P62891 AC061965.1-201ENST00000560524 1465 ntBASIC10.04□□□□□ -0.8
RPL39P62891 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 LINC01165-201ENST00000445190 1623 ntBASIC10.04□□□□□ -0.8
RPL39P62891 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC10.04□□□□□ -0.8
RPL39P62891 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC10.04□□□□□ -0.8
RPL39P62891 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
RPL39P62891 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC10.03□□□□□ -0.8
RPL39P62891 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
RPL39P62891 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC10.03□□□□□ -0.8
RPL39P62891 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
RPL39P62891 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
RPL39P62891 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC10.03□□□□□ -0.8
RPL39P62891 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC10.03□□□□□ -0.8
RPL39P62891 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
RPL39P62891 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms