Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB1AP62820 RN7SL530P-201ENST00000485097 298 ntBASIC12.5□□□□□ -0.41
RAB1AP62820 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB1AP62820 HIST2H2BC-201ENST00000498492 580 ntBASIC12.5□□□□□ -0.41
RAB1AP62820 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB1AP62820 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB1AP62820 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB1AP62820 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB1AP62820 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB1AP62820 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB1AP62820 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB1AP62820 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB1AP62820 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB1AP62820 AC007952.5-201ENST00000572818 1486 ntBASIC12.5□□□□□ -0.41
RAB1AP62820 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
RAB1AP62820 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB1AP62820 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB1AP62820 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB1AP62820 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB1AP62820 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB1AP62820 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB1AP62820 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB1AP62820 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB1AP62820 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB1AP62820 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB1AP62820 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB1AP62820 AC005562.1-201ENST00000583030 3219 ntBASIC12.5□□□□□ -0.41
RAB1AP62820 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB1AP62820 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB1AP62820 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB1AP62820 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RAB1AP62820 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RAB1AP62820 AL139385.1-201ENST00000611744 3272 ntBASIC12.49□□□□□ -0.41
RAB1AP62820 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB1AP62820 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB1AP62820 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.49□□□□□ -0.41
RAB1AP62820 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB1AP62820 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB1AP62820 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB1AP62820 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 CALR4P-201ENST00000431943 946 ntBASIC12.49□□□□□ -0.41
RAB1AP62820 Z97180.1-201ENST00000445173 988 ntBASIC12.49□□□□□ -0.41
RAB1AP62820 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB1AP62820 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.49□□□□□ -0.41
RAB1AP62820 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB1AP62820 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB1AP62820 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.49□□□□□ -0.41
RAB1AP62820 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB1AP62820 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.49□□□□□ -0.41
RAB1AP62820 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB1AP62820 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB1AP62820 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.49□□□□□ -0.41
RAB1AP62820 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
RAB1AP62820 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.49□□□□□ -0.41
RAB1AP62820 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RAB1AP62820 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RAB1AP62820 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RAB1AP62820 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB1AP62820 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB1AP62820 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB1AP62820 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
RAB1AP62820 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RAB1AP62820 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RAB1AP62820 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB1AP62820 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB1AP62820 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB1AP62820 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB1AP62820 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB1AP62820 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB1AP62820 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.48□□□□□ -0.41
RAB1AP62820 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms