Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.02□□□□□ -0.33
RFC3P40938 HPGD-203ENST00000422112 805 ntTSL 2 BASIC13.02□□□□□ -0.33
RFC3P40938 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RFC3P40938 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.02□□□□□ -0.33
RFC3P40938 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.02□□□□□ -0.33
RFC3P40938 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RFC3P40938 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.02□□□□□ -0.33
RFC3P40938 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.02□□□□□ -0.33
RFC3P40938 LDHBP1-201ENST00000455730 1119 ntBASIC13.02□□□□□ -0.33
RFC3P40938 FTH1P22-201ENST00000456305 520 ntBASIC13.02□□□□□ -0.33
RFC3P40938 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.02□□□□□ -0.33
RFC3P40938 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.02□□□□□ -0.33
RFC3P40938 AC114947.1-202ENST00000514136 344 ntBASIC13.02□□□□□ -0.33
RFC3P40938 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFC3P40938 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
RFC3P40938 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RFC3P40938 KRT8P1-201ENST00000557533 1207 ntBASIC13.02□□□□□ -0.33
RFC3P40938 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RFC3P40938 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.02□□□□□ -0.33
RFC3P40938 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFC3P40938 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.02□□□□□ -0.33
RFC3P40938 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.02□□□□□ -0.33
RFC3P40938 MIR6842-201ENST00000612539 65 ntBASIC13.02□□□□□ -0.33
RFC3P40938 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.02□□□□□ -0.33
RFC3P40938 LINC02486-201ENST00000604157 3000 ntBASIC13.02□□□□□ -0.33
RFC3P40938 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFC3P40938 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFC3P40938 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.02□□□□□ -0.33
RFC3P40938 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFC3P40938 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
RFC3P40938 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.02□□□□□ -0.33
RFC3P40938 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFC3P40938 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFC3P40938 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFC3P40938 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.02□□□□□ -0.33
RFC3P40938 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RFC3P40938 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.02□□□□□ -0.33
RFC3P40938 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RFC3P40938 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.02□□□□□ -0.33
RFC3P40938 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RFC3P40938 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFC3P40938 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFC3P40938 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
RFC3P40938 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
RFC3P40938 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFC3P40938 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFC3P40938 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RFC3P40938 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RFC3P40938 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFC3P40938 Z69890.1-201ENST00000382990 339 ntBASIC13.01□□□□□ -0.33
RFC3P40938 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFC3P40938 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.01□□□□□ -0.33
RFC3P40938 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.01□□□□□ -0.33
RFC3P40938 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.01□□□□□ -0.33
RFC3P40938 AP002803.1-201ENST00000528836 498 ntBASIC13.01□□□□□ -0.33
RFC3P40938 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.01□□□□□ -0.33
RFC3P40938 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.01□□□□□ -0.33
RFC3P40938 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.01□□□□□ -0.33
RFC3P40938 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.01□□□□□ -0.33
RFC3P40938 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.01□□□□□ -0.33
RFC3P40938 MIR6727-201ENST00000620702 65 ntBASIC13.01□□□□□ -0.33
RFC3P40938 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RFC3P40938 AC064801.2-201ENST00000625052 1303 ntBASIC13.01□□□□□ -0.33
RFC3P40938 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.01□□□□□ -0.33
RFC3P40938 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.01□□□□□ -0.33
RFC3P40938 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.01□□□□□ -0.33
RFC3P40938 CCT8L1P-201ENST00000465400 1674 ntBASIC13.01□□□□□ -0.33
RFC3P40938 RN7SL832P-201ENST00000607781 1756 ntBASIC13.01□□□□□ -0.33
RFC3P40938 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RFC3P40938 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.01□□□□□ -0.33
RFC3P40938 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.01□□□□□ -0.33
RFC3P40938 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RFC3P40938 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.01□□□□□ -0.33
RFC3P40938 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.01□□□□□ -0.33
RFC3P40938 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFC3P40938 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFC3P40938 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RFC3P40938 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFC3P40938 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.01□□□□□ -0.33
RFC3P40938 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFC3P40938 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFC3P40938 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.01□□□□□ -0.33
RFC3P40938 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RFC3P40938 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.01□□□□□ -0.33
RFC3P40938 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFC3P40938 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RFC3P40938 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13□□□□□ -0.33
RFC3P40938 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFC3P40938 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms