Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HOXA6P31267 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.69□□□□□ -0.22
HOXA6P31267 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
HOXA6P31267 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HOXA6P31267 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.69□□□□□ -0.22
HOXA6P31267 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HOXA6P31267 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 CCL25-202ENST00000315626 450 ntTSL 2 BASIC13.69□□□□□ -0.22
HOXA6P31267 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC13.69□□□□□ -0.22
HOXA6P31267 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC13.69□□□□□ -0.22
HOXA6P31267 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC13.69□□□□□ -0.22
HOXA6P31267 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC13.69□□□□□ -0.22
HOXA6P31267 PSME2P2-201ENST00000453033 700 ntBASIC13.69□□□□□ -0.22
HOXA6P31267 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC13.69□□□□□ -0.22
HOXA6P31267 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC13.69□□□□□ -0.22
HOXA6P31267 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC13.69□□□□□ -0.22
HOXA6P31267 MYL6-215ENST00000549566 685 ntTSL 2 BASIC13.69□□□□□ -0.22
HOXA6P31267 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC13.69□□□□□ -0.22
HOXA6P31267 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC13.69□□□□□ -0.22
HOXA6P31267 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC13.69□□□□□ -0.22
HOXA6P31267 AP001462.1-201ENST00000594089 452 ntBASIC13.69□□□□□ -0.22
HOXA6P31267 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HOXA6P31267 PTN-202ENST00000393083 1599 ntTSL 5 BASIC13.69□□□□□ -0.22
HOXA6P31267 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC13.69□□□□□ -0.22
HOXA6P31267 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
HOXA6P31267 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HOXA6P31267 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.68□□□□□ -0.22
HOXA6P31267 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HOXA6P31267 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
HOXA6P31267 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC13.68□□□□□ -0.22
HOXA6P31267 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC13.68□□□□□ -0.22
HOXA6P31267 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC13.68□□□□□ -0.22
HOXA6P31267 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HOXA6P31267 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC13.68□□□□□ -0.22
HOXA6P31267 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.68□□□□□ -0.22
HOXA6P31267 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
HOXA6P31267 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC13.68□□□□□ -0.22
HOXA6P31267 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HOXA6P31267 RPL14-203ENST00000416518 812 ntTSL 3 BASIC13.68□□□□□ -0.22
HOXA6P31267 SNRPCP15-201ENST00000424055 192 ntBASIC13.68□□□□□ -0.22
HOXA6P31267 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HOXA6P31267 FDPSP7-201ENST00000429043 1054 ntBASIC13.68□□□□□ -0.22
HOXA6P31267 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC13.68□□□□□ -0.22
HOXA6P31267 AL356000.1-201ENST00000441073 1238 ntBASIC13.68□□□□□ -0.22
HOXA6P31267 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
HOXA6P31267 RN7SL846P-201ENST00000467429 292 ntBASIC13.68□□□□□ -0.22
HOXA6P31267 SNRPD2P2-201ENST00000473818 333 ntBASIC13.68□□□□□ -0.22
HOXA6P31267 AF186996.6-201ENST00000485294 149 ntBASIC13.68□□□□□ -0.22
HOXA6P31267 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC13.68□□□□□ -0.22
HOXA6P31267 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC13.68□□□□□ -0.22
HOXA6P31267 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC13.68□□□□□ -0.22
HOXA6P31267 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC13.68□□□□□ -0.22
HOXA6P31267 ABCC6P1-203ENST00000565566 1170 ntBASIC13.68□□□□□ -0.22
HOXA6P31267 RN7SL162P-201ENST00000579233 292 ntBASIC13.68□□□□□ -0.22
HOXA6P31267 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC13.68□□□□□ -0.22
HOXA6P31267 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC13.68□□□□□ -0.22
HOXA6P31267 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC13.68□□□□□ -0.22
HOXA6P31267 AC123912.6-201ENST00000612657 315 ntBASIC13.68□□□□□ -0.22
HOXA6P31267 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 AC106782.5-201ENST00000616011 337 ntBASIC13.68□□□□□ -0.22
HOXA6P31267 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HOXA6P31267 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms