Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.39□□□□□ -0.11
NFKB1P19838 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NFKB1P19838 AGAP12P-201ENST00000585227 2359 ntBASIC14.39□□□□□ -0.11
NFKB1P19838 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.39□□□□□ -0.11
NFKB1P19838 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NFKB1P19838 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NFKB1P19838 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.38□□□□□ -0.11
NFKB1P19838 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.38□□□□□ -0.11
NFKB1P19838 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NFKB1P19838 AL031595.1-201ENST00000623969 4709 ntBASIC14.38□□□□□ -0.11
NFKB1P19838 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NFKB1P19838 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 CICP17-201ENST00000418553 2377 ntBASIC14.38□□□□□ -0.11
NFKB1P19838 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NFKB1P19838 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.38□□□□□ -0.11
NFKB1P19838 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NFKB1P19838 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.38□□□□□ -0.11
NFKB1P19838 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
NFKB1P19838 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.38□□□□□ -0.11
NFKB1P19838 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.38□□□□□ -0.11
NFKB1P19838 CHCHD2P2-201ENST00000503744 321 ntBASIC14.38□□□□□ -0.11
NFKB1P19838 AC092658.1-201ENST00000505836 891 ntBASIC14.38□□□□□ -0.11
NFKB1P19838 AP001258.2-201ENST00000529891 490 ntBASIC14.38□□□□□ -0.11
NFKB1P19838 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.38□□□□□ -0.11
NFKB1P19838 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.38□□□□□ -0.11
NFKB1P19838 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.38□□□□□ -0.11
NFKB1P19838 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.38□□□□□ -0.11
NFKB1P19838 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
NFKB1P19838 MIR6869-201ENST00000619434 62 ntBASIC14.38□□□□□ -0.11
NFKB1P19838 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.38□□□□□ -0.11
NFKB1P19838 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.38□□□□□ -0.11
NFKB1P19838 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.38□□□□□ -0.11
NFKB1P19838 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.38□□□□□ -0.11
NFKB1P19838 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NFKB1P19838 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.38□□□□□ -0.11
NFKB1P19838 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.38□□□□□ -0.11
NFKB1P19838 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NFKB1P19838 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
NFKB1P19838 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.38□□□□□ -0.11
NFKB1P19838 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NFKB1P19838 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.37□□□□□ -0.11
NFKB1P19838 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NFKB1P19838 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NFKB1P19838 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.37□□□□□ -0.11
NFKB1P19838 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.37□□□□□ -0.11
NFKB1P19838 SALL4P6-201ENST00000429385 1691 ntBASIC14.37□□□□□ -0.11
NFKB1P19838 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.37□□□□□ -0.11
NFKB1P19838 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NFKB1P19838 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.37□□□□□ -0.11
NFKB1P19838 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.37□□□□□ -0.11
NFKB1P19838 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NFKB1P19838 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NFKB1P19838 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.37□□□□□ -0.11
NFKB1P19838 DUX4L50-201ENST00000455245 715 ntBASIC14.37□□□□□ -0.11
NFKB1P19838 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.37□□□□□ -0.11
NFKB1P19838 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NFKB1P19838 ZNF767P-206ENST00000513792 565 ntBASIC14.37□□□□□ -0.11
NFKB1P19838 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.37□□□□□ -0.11
NFKB1P19838 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.37□□□□□ -0.11
NFKB1P19838 AC135782.3-201ENST00000562782 2105 ntBASIC14.37□□□□□ -0.11
NFKB1P19838 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.37□□□□□ -0.11
NFKB1P19838 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms