Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.4■□□□□ 0.22
ERCC3P19447 MYADML-201ENST00000474610 2147 ntBASIC16.4■□□□□ 0.22
ERCC3P19447 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.4■□□□□ 0.22
ERCC3P19447 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ERCC3P19447 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ERCC3P19447 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ERCC3P19447 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC3P19447 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ERCC3P19447 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC16.39■□□□□ 0.21
ERCC3P19447 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.39■□□□□ 0.21
ERCC3P19447 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.39■□□□□ 0.21
ERCC3P19447 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.39■□□□□ 0.21
ERCC3P19447 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 PTENP1-202ENST00000532280 3996 ntBASIC16.39■□□□□ 0.21
ERCC3P19447 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 PYY2-201ENST00000315776 282 ntBASIC16.39■□□□□ 0.21
ERCC3P19447 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
ERCC3P19447 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.39■□□□□ 0.21
ERCC3P19447 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
ERCC3P19447 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.39■□□□□ 0.21
ERCC3P19447 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ERCC3P19447 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.39■□□□□ 0.21
ERCC3P19447 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.39■□□□□ 0.21
ERCC3P19447 RN7SL357P-201ENST00000581065 298 ntBASIC16.39■□□□□ 0.21
ERCC3P19447 AC140113.1-201ENST00000603467 169 ntBASIC16.39■□□□□ 0.21
ERCC3P19447 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.39■□□□□ 0.21
ERCC3P19447 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.39■□□□□ 0.21
ERCC3P19447 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.39■□□□□ 0.21
ERCC3P19447 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.39■□□□□ 0.21
ERCC3P19447 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ERCC3P19447 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ERCC3P19447 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.39■□□□□ 0.21
ERCC3P19447 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.39■□□□□ 0.21
ERCC3P19447 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
ERCC3P19447 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 CR383656.2-201ENST00000548656 2254 ntBASIC16.39■□□□□ 0.21
ERCC3P19447 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.39■□□□□ 0.21
ERCC3P19447 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ERCC3P19447 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC3P19447 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.38■□□□□ 0.21
ERCC3P19447 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ERCC3P19447 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.38■□□□□ 0.21
ERCC3P19447 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
ERCC3P19447 AC067931.2-201ENST00000623655 2003 ntBASIC16.38■□□□□ 0.21
ERCC3P19447 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 AC215219.1-201ENST00000400706 1817 ntBASIC16.38■□□□□ 0.21
ERCC3P19447 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.38■□□□□ 0.21
ERCC3P19447 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ERCC3P19447 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
ERCC3P19447 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ERCC3P19447 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
ERCC3P19447 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.38■□□□□ 0.21
ERCC3P19447 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.38■□□□□ 0.21
ERCC3P19447 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.38■□□□□ 0.21
ERCC3P19447 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 AC026410.1-201ENST00000507366 1101 ntBASIC16.38■□□□□ 0.21
ERCC3P19447 AC095040.1-201ENST00000513286 675 ntBASIC16.38■□□□□ 0.21
ERCC3P19447 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC3P19447 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC16.38■□□□□ 0.21
ERCC3P19447 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms