Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.11□□□□□ -0.15
CAPNS1P04632 RN7SL832P-201ENST00000607781 1756 ntBASIC14.11□□□□□ -0.15
CAPNS1P04632 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CAPNS1P04632 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CAPNS1P04632 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CAPNS1P04632 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CAPNS1P04632 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CAPNS1P04632 AP002761.4-201ENST00000565433 3361 ntBASIC14.11□□□□□ -0.15
CAPNS1P04632 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CAPNS1P04632 IL9RP3-201ENST00000442856 1674 ntBASIC14.1□□□□□ -0.15
CAPNS1P04632 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CAPNS1P04632 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CAPNS1P04632 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CAPNS1P04632 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPNS1P04632 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.1□□□□□ -0.15
CAPNS1P04632 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CAPNS1P04632 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CAPNS1P04632 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPNS1P04632 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CAPNS1P04632 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPNS1P04632 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.1□□□□□ -0.15
CAPNS1P04632 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPNS1P04632 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.1□□□□□ -0.15
CAPNS1P04632 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.1□□□□□ -0.15
CAPNS1P04632 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CAPNS1P04632 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC14.1□□□□□ -0.15
CAPNS1P04632 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPNS1P04632 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.1□□□□□ -0.15
CAPNS1P04632 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPNS1P04632 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC14.1□□□□□ -0.15
CAPNS1P04632 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.1□□□□□ -0.15
CAPNS1P04632 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
CAPNS1P04632 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPNS1P04632 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CAPNS1P04632 AC073592.2-201ENST00000623062 780 ntBASIC14.1□□□□□ -0.15
CAPNS1P04632 AP001184.1-201ENST00000637936 376 ntBASIC14.1□□□□□ -0.15
CAPNS1P04632 Z98259.2-201ENST00000641583 609 ntBASIC14.1□□□□□ -0.15
CAPNS1P04632 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPNS1P04632 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPNS1P04632 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPNS1P04632 AL008718.2-201ENST00000609206 1313 ntBASIC14.1□□□□□ -0.15
CAPNS1P04632 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
CAPNS1P04632 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.1□□□□□ -0.15
CAPNS1P04632 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.1□□□□□ -0.15
CAPNS1P04632 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
CAPNS1P04632 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CAPNS1P04632 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CAPNS1P04632 Z82170.1-201ENST00000625081 3192 ntBASIC14.1□□□□□ -0.15
CAPNS1P04632 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CAPNS1P04632 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CAPNS1P04632 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
CAPNS1P04632 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CAPNS1P04632 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.09□□□□□ -0.15
CAPNS1P04632 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CAPNS1P04632 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CAPNS1P04632 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CAPNS1P04632 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 AL357373.1-201ENST00000394974 322 ntBASIC14.09□□□□□ -0.15
CAPNS1P04632 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CAPNS1P04632 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.09□□□□□ -0.15
CAPNS1P04632 AQP7P5-201ENST00000428759 1049 ntBASIC14.09□□□□□ -0.15
CAPNS1P04632 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 AQP7P4-201ENST00000447083 1042 ntBASIC14.09□□□□□ -0.15
CAPNS1P04632 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CAPNS1P04632 AQP7P2-201ENST00000453967 1041 ntBASIC14.09□□□□□ -0.15
CAPNS1P04632 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.09□□□□□ -0.15
CAPNS1P04632 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.09□□□□□ -0.15
CAPNS1P04632 AC027139.1-201ENST00000565286 951 ntBASIC14.09□□□□□ -0.15
CAPNS1P04632 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
CAPNS1P04632 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC14.09□□□□□ -0.15
CAPNS1P04632 AC107464.3-201ENST00000609172 737 ntBASIC14.09□□□□□ -0.15
CAPNS1P04632 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CAPNS1P04632 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CAPNS1P04632 AQP7P3-201ENST00000624547 1041 ntBASIC14.09□□□□□ -0.15
CAPNS1P04632 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CAPNS1P04632 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms