Protein–RNA interactions for Protein: B3KS81

SRRM5, Serine/arginine repetitive matrix protein 5, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM5B3KS81 MARK2P9-201ENST00000430958 1727 ntBASIC11.85□□□□□ -0.51
SRRM5B3KS81 FAM90A12P-201ENST00000519497 2375 ntBASIC11.85□□□□□ -0.51
SRRM5B3KS81 FAM90A24P-201ENST00000520792 2369 ntBASIC11.85□□□□□ -0.51
SRRM5B3KS81 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.85□□□□□ -0.51
SRRM5B3KS81 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SRRM5B3KS81 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SRRM5B3KS81 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SRRM5B3KS81 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SRRM5B3KS81 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
SRRM5B3KS81 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SRRM5B3KS81 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SRRM5B3KS81 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
SRRM5B3KS81 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SRRM5B3KS81 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SRRM5B3KS81 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 AC008620.2-201ENST00000510294 1569 ntBASIC11.84□□□□□ -0.51
SRRM5B3KS81 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 MARK2P16-201ENST00000605714 1723 ntBASIC11.84□□□□□ -0.51
SRRM5B3KS81 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 MIR645-201ENST00000385283 94 ntBASIC11.84□□□□□ -0.51
SRRM5B3KS81 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 AC026320.2-201ENST00000434379 478 ntBASIC11.84□□□□□ -0.51
SRRM5B3KS81 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 FTLP1-201ENST00000449155 526 ntBASIC11.84□□□□□ -0.51
SRRM5B3KS81 DUTP3-201ENST00000450025 415 ntBASIC11.84□□□□□ -0.51
SRRM5B3KS81 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 AC242376.1-201ENST00000559033 726 ntBASIC11.84□□□□□ -0.51
SRRM5B3KS81 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 NAT9-220ENST00000582870 896 ntTSL 5 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 AL353770.1-201ENST00000614915 403 ntBASIC11.84□□□□□ -0.51
SRRM5B3KS81 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 AL139424.3-202ENST00000641619 917 ntBASIC11.84□□□□□ -0.51
SRRM5B3KS81 FMO6P-201ENST00000236166 1620 ntBASIC11.84□□□□□ -0.51
SRRM5B3KS81 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 SALL4P6-201ENST00000429385 1691 ntBASIC11.84□□□□□ -0.51
SRRM5B3KS81 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SRRM5B3KS81 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC11.84□□□□□ -0.51
SRRM5B3KS81 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
SRRM5B3KS81 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
SRRM5B3KS81 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
SRRM5B3KS81 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
SRRM5B3KS81 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC11.83□□□□□ -0.51
SRRM5B3KS81 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
SRRM5B3KS81 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM5B3KS81 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SRRM5B3KS81 KRT8P43-201ENST00000406052 1458 ntBASIC11.83□□□□□ -0.52
SRRM5B3KS81 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SRRM5B3KS81 NCLP1-201ENST00000445357 1963 ntBASIC11.83□□□□□ -0.52
SRRM5B3KS81 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.83□□□□□ -0.52
SRRM5B3KS81 AC089987.1-201ENST00000551654 2209 ntBASIC11.83□□□□□ -0.52
SRRM5B3KS81 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SRRM5B3KS81 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms