Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
DDX49Q9Y6V7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
DDX49Q9Y6V7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.82■■□□□ 1.88
DDX49Q9Y6V7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
DDX49Q9Y6V7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.82■■□□□ 1.88
DDX49Q9Y6V7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
DDX49Q9Y6V7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC26.82■■□□□ 1.88
DDX49Q9Y6V7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
DDX49Q9Y6V7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
DDX49Q9Y6V7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
DDX49Q9Y6V7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
DDX49Q9Y6V7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.81■■□□□ 1.88
DDX49Q9Y6V7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
DDX49Q9Y6V7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
DDX49Q9Y6V7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
DDX49Q9Y6V7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.81■■□□□ 1.88
DDX49Q9Y6V7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
DDX49Q9Y6V7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC26.81■■□□□ 1.88
DDX49Q9Y6V7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
DDX49Q9Y6V7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
DDX49Q9Y6V7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.8■■□□□ 1.88
DDX49Q9Y6V7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
DDX49Q9Y6V7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
DDX49Q9Y6V7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
DDX49Q9Y6V7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
DDX49Q9Y6V7 AC131281.2-201ENST00000520478 145 ntBASIC26.8■■□□□ 1.88
DDX49Q9Y6V7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
DDX49Q9Y6V7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
DDX49Q9Y6V7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
DDX49Q9Y6V7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
DDX49Q9Y6V7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
DDX49Q9Y6V7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
DDX49Q9Y6V7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
DDX49Q9Y6V7 AC011551.1-201ENST00000614101 683 ntBASIC26.79■■□□□ 1.88
DDX49Q9Y6V7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
DDX49Q9Y6V7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
DDX49Q9Y6V7 LINC00565-201ENST00000562710 2331 ntBASIC26.79■■□□□ 1.88
DDX49Q9Y6V7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
DDX49Q9Y6V7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
DDX49Q9Y6V7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
DDX49Q9Y6V7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.79■■□□□ 1.88
DDX49Q9Y6V7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
DDX49Q9Y6V7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
DDX49Q9Y6V7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
DDX49Q9Y6V7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.78■■□□□ 1.88
DDX49Q9Y6V7 AC010997.5-201ENST00000609182 354 ntBASIC26.78■■□□□ 1.88
DDX49Q9Y6V7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
DDX49Q9Y6V7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
DDX49Q9Y6V7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
DDX49Q9Y6V7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
DDX49Q9Y6V7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
DDX49Q9Y6V7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
DDX49Q9Y6V7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.77■■□□□ 1.88
DDX49Q9Y6V7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.77■■□□□ 1.88
DDX49Q9Y6V7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.77■■□□□ 1.88
DDX49Q9Y6V7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
DDX49Q9Y6V7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.77■■□□□ 1.88
DDX49Q9Y6V7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
DDX49Q9Y6V7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
DDX49Q9Y6V7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
DDX49Q9Y6V7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
DDX49Q9Y6V7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
DDX49Q9Y6V7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.76■■□□□ 1.87
DDX49Q9Y6V7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.76■■□□□ 1.87
DDX49Q9Y6V7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.76■■□□□ 1.87
DDX49Q9Y6V7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
DDX49Q9Y6V7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.76■■□□□ 1.87
DDX49Q9Y6V7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
DDX49Q9Y6V7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
DDX49Q9Y6V7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
DDX49Q9Y6V7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.75■■□□□ 1.87
DDX49Q9Y6V7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
DDX49Q9Y6V7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.75■■□□□ 1.87
DDX49Q9Y6V7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.75■■□□□ 1.87
DDX49Q9Y6V7 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.75■■□□□ 1.87
DDX49Q9Y6V7 AL117332.1-201ENST00000622628 974 ntBASIC26.75■■□□□ 1.87
DDX49Q9Y6V7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
DDX49Q9Y6V7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
DDX49Q9Y6V7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.75■■□□□ 1.87
DDX49Q9Y6V7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
DDX49Q9Y6V7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
DDX49Q9Y6V7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
DDX49Q9Y6V7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
DDX49Q9Y6V7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.74■■□□□ 1.87
DDX49Q9Y6V7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
DDX49Q9Y6V7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.74■■□□□ 1.87
DDX49Q9Y6V7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.74■■□□□ 1.87
DDX49Q9Y6V7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
DDX49Q9Y6V7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
DDX49Q9Y6V7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
DDX49Q9Y6V7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
DDX49Q9Y6V7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
DDX49Q9Y6V7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC26.74■■□□□ 1.87
DDX49Q9Y6V7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
DDX49Q9Y6V7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.73■■□□□ 1.87
DDX49Q9Y6V7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.73■■□□□ 1.87
DDX49Q9Y6V7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.73■■□□□ 1.87
DDX49Q9Y6V7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.73■■□□□ 1.87
DDX49Q9Y6V7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
DDX49Q9Y6V7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms