Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
MKRN1Q9UHC7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
MKRN1Q9UHC7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC27.42■■□□□ 1.98
MKRN1Q9UHC7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.42■■□□□ 1.98
MKRN1Q9UHC7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC27.42■■□□□ 1.98
MKRN1Q9UHC7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
MKRN1Q9UHC7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
MKRN1Q9UHC7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
MKRN1Q9UHC7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
MKRN1Q9UHC7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC27.42■■□□□ 1.98
MKRN1Q9UHC7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC27.41■■□□□ 1.98
MKRN1Q9UHC7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC27.41■■□□□ 1.98
MKRN1Q9UHC7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.41■■□□□ 1.98
MKRN1Q9UHC7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
MKRN1Q9UHC7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
MKRN1Q9UHC7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC27.41■■□□□ 1.98
MKRN1Q9UHC7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
MKRN1Q9UHC7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC27.41■■□□□ 1.98
MKRN1Q9UHC7 NTF6G-201ENST00000591094 616 ntBASIC27.41■■□□□ 1.98
MKRN1Q9UHC7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC27.41■■□□□ 1.98
MKRN1Q9UHC7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
MKRN1Q9UHC7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC27.4■■□□□ 1.98
MKRN1Q9UHC7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC27.4■■□□□ 1.98
MKRN1Q9UHC7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC27.4■■□□□ 1.98
MKRN1Q9UHC7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC27.4■■□□□ 1.98
MKRN1Q9UHC7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
MKRN1Q9UHC7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
MKRN1Q9UHC7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC27.4■■□□□ 1.98
MKRN1Q9UHC7 AC005703.6-201ENST00000623265 1329 ntBASIC27.4■■□□□ 1.98
MKRN1Q9UHC7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC27.39■■□□□ 1.98
MKRN1Q9UHC7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.39■■□□□ 1.98
MKRN1Q9UHC7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC27.39■■□□□ 1.98
MKRN1Q9UHC7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC27.39■■□□□ 1.98
MKRN1Q9UHC7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
MKRN1Q9UHC7 AL022069.1-201ENST00000568025 1636 ntBASIC27.39■■□□□ 1.98
MKRN1Q9UHC7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
MKRN1Q9UHC7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
MKRN1Q9UHC7 HES6-206ENST00000409574 738 ntTSL 2 BASIC27.39■■□□□ 1.98
MKRN1Q9UHC7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
MKRN1Q9UHC7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
MKRN1Q9UHC7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
MKRN1Q9UHC7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC27.39■■□□□ 1.97
MKRN1Q9UHC7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
MKRN1Q9UHC7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC27.38■■□□□ 1.97
MKRN1Q9UHC7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
MKRN1Q9UHC7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
MKRN1Q9UHC7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC27.38■■□□□ 1.97
MKRN1Q9UHC7 AC136469.2-201ENST00000623944 1028 ntBASIC27.38■■□□□ 1.97
MKRN1Q9UHC7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC27.38■■□□□ 1.97
MKRN1Q9UHC7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
MKRN1Q9UHC7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC27.37■■□□□ 1.97
MKRN1Q9UHC7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC27.37■■□□□ 1.97
MKRN1Q9UHC7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
MKRN1Q9UHC7 BX842568.3-201ENST00000418104 571 ntBASIC27.37■■□□□ 1.97
MKRN1Q9UHC7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC27.37■■□□□ 1.97
MKRN1Q9UHC7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC27.37■■□□□ 1.97
MKRN1Q9UHC7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
MKRN1Q9UHC7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC27.37■■□□□ 1.97
MKRN1Q9UHC7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC27.37■■□□□ 1.97
MKRN1Q9UHC7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC27.37■■□□□ 1.97
MKRN1Q9UHC7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
MKRN1Q9UHC7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC27.37■■□□□ 1.97
MKRN1Q9UHC7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
MKRN1Q9UHC7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
MKRN1Q9UHC7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
MKRN1Q9UHC7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC27.36■■□□□ 1.97
MKRN1Q9UHC7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC27.36■■□□□ 1.97
MKRN1Q9UHC7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
MKRN1Q9UHC7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
MKRN1Q9UHC7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
MKRN1Q9UHC7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
MKRN1Q9UHC7 REST-206ENST00000612429 1376 ntTSL 5 BASIC27.35■■□□□ 1.97
MKRN1Q9UHC7 REST-207ENST00000616975 1370 ntTSL 5 BASIC27.35■■□□□ 1.97
MKRN1Q9UHC7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
MKRN1Q9UHC7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC27.35■■□□□ 1.97
MKRN1Q9UHC7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
MKRN1Q9UHC7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC27.35■■□□□ 1.97
MKRN1Q9UHC7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
MKRN1Q9UHC7 AC123595.1-201ENST00000440769 1046 ntBASIC27.35■■□□□ 1.97
MKRN1Q9UHC7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
MKRN1Q9UHC7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
MKRN1Q9UHC7 AP003733.4-201ENST00000623785 1697 ntBASIC27.35■■□□□ 1.97
MKRN1Q9UHC7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC27.35■■□□□ 1.97
MKRN1Q9UHC7 AC020928.2-201ENST00000588717 2197 ntBASIC27.35■■□□□ 1.97
MKRN1Q9UHC7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
MKRN1Q9UHC7 AC138932.3-201ENST00000567634 1902 ntBASIC27.34■■□□□ 1.97
MKRN1Q9UHC7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
MKRN1Q9UHC7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC27.34■■□□□ 1.97
MKRN1Q9UHC7 AC080038.1-201ENST00000611274 1154 ntBASIC27.34■■□□□ 1.97
MKRN1Q9UHC7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
MKRN1Q9UHC7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.33■■□□□ 1.97
MKRN1Q9UHC7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
MKRN1Q9UHC7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
MKRN1Q9UHC7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC27.33■■□□□ 1.97
MKRN1Q9UHC7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
MKRN1Q9UHC7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
MKRN1Q9UHC7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
MKRN1Q9UHC7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
MKRN1Q9UHC7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
MKRN1Q9UHC7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms