Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
ZFYVE28Q9HCC9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.04■■□□□ 1.76
ZFYVE28Q9HCC9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.04■■□□□ 1.76
ZFYVE28Q9HCC9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ZFYVE28Q9HCC9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.03■■□□□ 1.76
ZFYVE28Q9HCC9 GXYLT1P5-201ENST00000614548 1189 ntBASIC26.03■■□□□ 1.76
ZFYVE28Q9HCC9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.03■■□□□ 1.76
ZFYVE28Q9HCC9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.03■■□□□ 1.76
ZFYVE28Q9HCC9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.03■■□□□ 1.76
ZFYVE28Q9HCC9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
ZFYVE28Q9HCC9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
ZFYVE28Q9HCC9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ZFYVE28Q9HCC9 AC006015.1-201ENST00000429970 570 ntBASIC26.02■■□□□ 1.76
ZFYVE28Q9HCC9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ZFYVE28Q9HCC9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ZFYVE28Q9HCC9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.02■■□□□ 1.76
ZFYVE28Q9HCC9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ZFYVE28Q9HCC9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
ZFYVE28Q9HCC9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZFYVE28Q9HCC9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZFYVE28Q9HCC9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
ZFYVE28Q9HCC9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZFYVE28Q9HCC9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.01■■□□□ 1.75
ZFYVE28Q9HCC9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC26.01■■□□□ 1.75
ZFYVE28Q9HCC9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.01■■□□□ 1.75
ZFYVE28Q9HCC9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ZFYVE28Q9HCC9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26■■□□□ 1.75
ZFYVE28Q9HCC9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26■■□□□ 1.75
ZFYVE28Q9HCC9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26■■□□□ 1.75
ZFYVE28Q9HCC9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26■■□□□ 1.75
ZFYVE28Q9HCC9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
ZFYVE28Q9HCC9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC26■■□□□ 1.75
ZFYVE28Q9HCC9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26■■□□□ 1.75
ZFYVE28Q9HCC9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26■■□□□ 1.75
ZFYVE28Q9HCC9 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26■■□□□ 1.75
ZFYVE28Q9HCC9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ZFYVE28Q9HCC9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.99■■□□□ 1.75
ZFYVE28Q9HCC9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.99■■□□□ 1.75
ZFYVE28Q9HCC9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZFYVE28Q9HCC9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZFYVE28Q9HCC9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZFYVE28Q9HCC9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
ZFYVE28Q9HCC9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZFYVE28Q9HCC9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZFYVE28Q9HCC9 AC016769.1-201ENST00000409132 1010 ntBASIC25.99■■□□□ 1.75
ZFYVE28Q9HCC9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
ZFYVE28Q9HCC9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
ZFYVE28Q9HCC9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.99■■□□□ 1.75
ZFYVE28Q9HCC9 RAP2CP1-201ENST00000605103 478 ntBASIC25.99■■□□□ 1.75
ZFYVE28Q9HCC9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.99■■□□□ 1.75
ZFYVE28Q9HCC9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZFYVE28Q9HCC9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZFYVE28Q9HCC9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ZFYVE28Q9HCC9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
ZFYVE28Q9HCC9 AC092803.2-201ENST00000564287 1899 ntBASIC25.98■■□□□ 1.75
ZFYVE28Q9HCC9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ZFYVE28Q9HCC9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ZFYVE28Q9HCC9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ZFYVE28Q9HCC9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
ZFYVE28Q9HCC9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.98■■□□□ 1.75
ZFYVE28Q9HCC9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.98■■□□□ 1.75
ZFYVE28Q9HCC9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.98■■□□□ 1.75
ZFYVE28Q9HCC9 CDCA4P2-201ENST00000441182 718 ntBASIC25.98■■□□□ 1.75
ZFYVE28Q9HCC9 AC010525.1-201ENST00000585559 441 ntBASIC25.98■■□□□ 1.75
ZFYVE28Q9HCC9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ZFYVE28Q9HCC9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ZFYVE28Q9HCC9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
ZFYVE28Q9HCC9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.98■■□□□ 1.75
ZFYVE28Q9HCC9 AC091060.1-201ENST00000623524 1766 ntBASIC25.97■■□□□ 1.75
ZFYVE28Q9HCC9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
ZFYVE28Q9HCC9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.97■■□□□ 1.75
ZFYVE28Q9HCC9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.97■■□□□ 1.75
ZFYVE28Q9HCC9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.97■■□□□ 1.75
ZFYVE28Q9HCC9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25.97■■□□□ 1.75
ZFYVE28Q9HCC9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.97■■□□□ 1.75
ZFYVE28Q9HCC9 AC137761.2-201ENST00000561729 223 ntBASIC25.97■■□□□ 1.75
ZFYVE28Q9HCC9 AC145350.3-201ENST00000569033 163 ntBASIC25.97■■□□□ 1.75
ZFYVE28Q9HCC9 AC073111.5-205ENST00000641717 521 ntBASIC25.97■■□□□ 1.75
ZFYVE28Q9HCC9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.97■■□□□ 1.75
ZFYVE28Q9HCC9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.97■■□□□ 1.75
ZFYVE28Q9HCC9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
ZFYVE28Q9HCC9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
ZFYVE28Q9HCC9 OR2I1P-207ENST00000453522 948 ntBASIC25.96■■□□□ 1.75
ZFYVE28Q9HCC9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.96■■□□□ 1.75
ZFYVE28Q9HCC9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC25.96■■□□□ 1.75
ZFYVE28Q9HCC9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ZFYVE28Q9HCC9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.96■■□□□ 1.75
ZFYVE28Q9HCC9 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.95■■□□□ 1.75
ZFYVE28Q9HCC9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.75
ZFYVE28Q9HCC9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
ZFYVE28Q9HCC9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
ZFYVE28Q9HCC9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.95■■□□□ 1.74
ZFYVE28Q9HCC9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
ZFYVE28Q9HCC9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC25.95■■□□□ 1.74
ZFYVE28Q9HCC9 AL499627.2-201ENST00000606283 725 ntBASIC25.95■■□□□ 1.74
ZFYVE28Q9HCC9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.95■■□□□ 1.74
ZFYVE28Q9HCC9 AC105233.4-201ENST00000642045 216 ntBASIC25.95■■□□□ 1.74
ZFYVE28Q9HCC9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.95■■□□□ 1.74
ZFYVE28Q9HCC9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
ZFYVE28Q9HCC9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC25.95■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms