Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LITAFQ99732 LINC01971-201ENST00000617888 1048 ntBASIC15.03■□□□□ -0
LITAFQ99732 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LITAFQ99732 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LITAFQ99732 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.03■□□□□ -0
LITAFQ99732 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LITAFQ99732 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LITAFQ99732 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LITAFQ99732 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LITAFQ99732 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.03■□□□□ -0
LITAFQ99732 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.03■□□□□ -0
LITAFQ99732 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LITAFQ99732 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.02■□□□□ -0
LITAFQ99732 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LITAFQ99732 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LITAFQ99732 AC080038.3-201ENST00000623346 1952 ntBASIC15.02■□□□□ -0
LITAFQ99732 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.02■□□□□ -0
LITAFQ99732 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LITAFQ99732 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
LITAFQ99732 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC15.02■□□□□ -0
LITAFQ99732 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LITAFQ99732 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC15.02■□□□□ -0
LITAFQ99732 NRG1-221ENST00000614767 762 ntTSL 5 BASIC15.02■□□□□ -0
LITAFQ99732 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LITAFQ99732 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LITAFQ99732 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
LITAFQ99732 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LITAFQ99732 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LITAFQ99732 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
LITAFQ99732 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
LITAFQ99732 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LITAFQ99732 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LITAFQ99732 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LITAFQ99732 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LITAFQ99732 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LITAFQ99732 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
LITAFQ99732 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.01□□□□□ -0.01
LITAFQ99732 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC15.01□□□□□ -0.01
LITAFQ99732 AC025884.2-201ENST00000553429 711 ntBASIC15.01□□□□□ -0.01
LITAFQ99732 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LITAFQ99732 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LITAFQ99732 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LITAFQ99732 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LITAFQ99732 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LITAFQ99732 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LITAFQ99732 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LITAFQ99732 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LITAFQ99732 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LITAFQ99732 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LITAFQ99732 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LITAFQ99732 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LITAFQ99732 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15□□□□□ -0.01
LITAFQ99732 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LITAFQ99732 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
LITAFQ99732 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LITAFQ99732 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LITAFQ99732 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
LITAFQ99732 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LITAFQ99732 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC15□□□□□ -0.01
LITAFQ99732 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LITAFQ99732 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LITAFQ99732 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LITAFQ99732 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
LITAFQ99732 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LITAFQ99732 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LITAFQ99732 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LITAFQ99732 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LITAFQ99732 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC14.99□□□□□ -0.01
LITAFQ99732 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LITAFQ99732 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LITAFQ99732 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LITAFQ99732 FAM99A-202ENST00000538190 1989 ntBASIC14.99□□□□□ -0.01
LITAFQ99732 MIR3960-201ENST00000583311 91 ntBASIC14.99□□□□□ -0.01
LITAFQ99732 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC14.99□□□□□ -0.01
LITAFQ99732 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LITAFQ99732 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC14.99□□□□□ -0.01
LITAFQ99732 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LITAFQ99732 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LITAFQ99732 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LITAFQ99732 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC14.99□□□□□ -0.01
LITAFQ99732 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LITAFQ99732 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LITAFQ99732 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LITAFQ99732 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LITAFQ99732 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.98□□□□□ -0.01
LITAFQ99732 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LITAFQ99732 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
LITAFQ99732 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.98□□□□□ -0.01
LITAFQ99732 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LITAFQ99732 AC005229.4-201ENST00000610085 2198 ntBASIC14.98□□□□□ -0.01
LITAFQ99732 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.98□□□□□ -0.01
LITAFQ99732 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.98□□□□□ -0.01
LITAFQ99732 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LITAFQ99732 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LITAFQ99732 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LITAFQ99732 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.98□□□□□ -0.01
LITAFQ99732 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
LITAFQ99732 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
LITAFQ99732 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LITAFQ99732 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms