Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPB3Q92617 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPB3Q92617 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPB3Q92617 EP400NL-214ENST00000641289 2402 ntBASIC17.7■□□□□ 0.42
NPIPB3Q92617 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPB3Q92617 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPB3Q92617 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPB3Q92617 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NPIPB3Q92617 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPB3Q92617 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NPIPB3Q92617 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NPIPB3Q92617 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPIPB3Q92617 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.69■□□□□ 0.42
NPIPB3Q92617 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
NPIPB3Q92617 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NPIPB3Q92617 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPB3Q92617 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPB3Q92617 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPB3Q92617 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NPIPB3Q92617 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.68■□□□□ 0.42
NPIPB3Q92617 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.68■□□□□ 0.42
NPIPB3Q92617 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPB3Q92617 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPB3Q92617 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPB3Q92617 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB3Q92617 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.67■□□□□ 0.42
NPIPB3Q92617 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB3Q92617 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.67■□□□□ 0.42
NPIPB3Q92617 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB3Q92617 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.67■□□□□ 0.42
NPIPB3Q92617 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB3Q92617 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB3Q92617 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.67■□□□□ 0.42
NPIPB3Q92617 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.67■□□□□ 0.42
NPIPB3Q92617 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB3Q92617 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.67■□□□□ 0.42
NPIPB3Q92617 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NPIPB3Q92617 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB3Q92617 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB3Q92617 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB3Q92617 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
NPIPB3Q92617 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB3Q92617 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB3Q92617 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.66■□□□□ 0.42
NPIPB3Q92617 THA1P-201ENST00000590384 1145 ntBASIC17.66■□□□□ 0.42
NPIPB3Q92617 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB3Q92617 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB3Q92617 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB3Q92617 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB3Q92617 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB3Q92617 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB3Q92617 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB3Q92617 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB3Q92617 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB3Q92617 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB3Q92617 KRT18P24-201ENST00000344739 1156 ntBASIC17.65■□□□□ 0.42
NPIPB3Q92617 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.65■□□□□ 0.42
NPIPB3Q92617 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB3Q92617 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB3Q92617 AC074183.2-201ENST00000623112 922 ntBASIC17.65■□□□□ 0.42
NPIPB3Q92617 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NPIPB3Q92617 GUSBP5-202ENST00000510805 1989 ntBASIC17.65■□□□□ 0.42
NPIPB3Q92617 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB3Q92617 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.65■□□□□ 0.42
NPIPB3Q92617 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.65■□□□□ 0.42
NPIPB3Q92617 AF131216.4-201ENST00000638924 1588 ntBASIC17.65■□□□□ 0.42
NPIPB3Q92617 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB3Q92617 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NPIPB3Q92617 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.64■□□□□ 0.41
NPIPB3Q92617 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.64■□□□□ 0.41
NPIPB3Q92617 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB3Q92617 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NPIPB3Q92617 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB3Q92617 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NPIPB3Q92617 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB3Q92617 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB3Q92617 AC004987.1-201ENST00000428627 508 ntBASIC17.64■□□□□ 0.41
NPIPB3Q92617 ATP5G2P3-201ENST00000429083 425 ntBASIC17.64■□□□□ 0.41
NPIPB3Q92617 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB3Q92617 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.64■□□□□ 0.41
NPIPB3Q92617 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.64■□□□□ 0.41
NPIPB3Q92617 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB3Q92617 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.64■□□□□ 0.41
NPIPB3Q92617 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB3Q92617 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NPIPB3Q92617 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.64■□□□□ 0.41
NPIPB3Q92617 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.64■□□□□ 0.41
NPIPB3Q92617 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB3Q92617 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB3Q92617 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB3Q92617 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NPIPB3Q92617 AC079630.1-202ENST00000618127 1840 ntBASIC17.63■□□□□ 0.41
NPIPB3Q92617 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB3Q92617 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB3Q92617 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB3Q92617 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB3Q92617 MIR4281-201ENST00000580852 62 ntBASIC17.63■□□□□ 0.41
NPIPB3Q92617 PVT1_1.1-201ENST00000615125 194 ntBASIC17.63■□□□□ 0.41
NPIPB3Q92617 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NPIPB3Q92617 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms