Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HMGCLL1Q8TB92 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.14■■□□□ 1.13
HMGCLL1Q8TB92 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
HMGCLL1Q8TB92 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
HMGCLL1Q8TB92 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
HMGCLL1Q8TB92 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.13■■□□□ 1.13
HMGCLL1Q8TB92 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCLL1Q8TB92 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.13■■□□□ 1.13
HMGCLL1Q8TB92 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCLL1Q8TB92 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCLL1Q8TB92 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
HMGCLL1Q8TB92 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCLL1Q8TB92 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
HMGCLL1Q8TB92 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
HMGCLL1Q8TB92 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
HMGCLL1Q8TB92 AL117328.2-201ENST00000624617 1940 ntBASIC22.13■■□□□ 1.13
HMGCLL1Q8TB92 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.13■■□□□ 1.13
HMGCLL1Q8TB92 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCLL1Q8TB92 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
HMGCLL1Q8TB92 ANOS2P-203ENST00000472227 1816 ntBASIC22.13■■□□□ 1.13
HMGCLL1Q8TB92 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
HMGCLL1Q8TB92 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HMGCLL1Q8TB92 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HMGCLL1Q8TB92 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.12■■□□□ 1.13
HMGCLL1Q8TB92 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HMGCLL1Q8TB92 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HMGCLL1Q8TB92 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
HMGCLL1Q8TB92 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
HMGCLL1Q8TB92 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HMGCLL1Q8TB92 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HMGCLL1Q8TB92 ALDH1A3-203ENST00000557963 1670 ntBASIC22.11■■□□□ 1.13
HMGCLL1Q8TB92 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.11■■□□□ 1.13
HMGCLL1Q8TB92 KRT16P3-201ENST00000439127 1283 ntBASIC22.11■■□□□ 1.13
HMGCLL1Q8TB92 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.11■■□□□ 1.13
HMGCLL1Q8TB92 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.11■■□□□ 1.13
HMGCLL1Q8TB92 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HMGCLL1Q8TB92 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
HMGCLL1Q8TB92 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
HMGCLL1Q8TB92 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HMGCLL1Q8TB92 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HMGCLL1Q8TB92 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HMGCLL1Q8TB92 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
HMGCLL1Q8TB92 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.1■■□□□ 1.13
HMGCLL1Q8TB92 AL356441.2-201ENST00000443009 864 ntBASIC22.1■■□□□ 1.13
HMGCLL1Q8TB92 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.1■■□□□ 1.13
HMGCLL1Q8TB92 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.1■■□□□ 1.13
HMGCLL1Q8TB92 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.1■■□□□ 1.13
HMGCLL1Q8TB92 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.1■■□□□ 1.13
HMGCLL1Q8TB92 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.1■■□□□ 1.13
HMGCLL1Q8TB92 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.1■■□□□ 1.13
HMGCLL1Q8TB92 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HMGCLL1Q8TB92 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
HMGCLL1Q8TB92 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
HMGCLL1Q8TB92 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HMGCLL1Q8TB92 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HMGCLL1Q8TB92 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.09■■□□□ 1.13
HMGCLL1Q8TB92 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HMGCLL1Q8TB92 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.09■■□□□ 1.13
HMGCLL1Q8TB92 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.09■■□□□ 1.13
HMGCLL1Q8TB92 MIR6724-1-201ENST00000616420 92 ntBASIC22.09■■□□□ 1.13
HMGCLL1Q8TB92 MIR6724-2-201ENST00000616483 92 ntBASIC22.09■■□□□ 1.13
HMGCLL1Q8TB92 MIR6724-4-201ENST00000617390 92 ntBASIC22.09■■□□□ 1.13
HMGCLL1Q8TB92 MIR6724-3-201ENST00000622482 92 ntBASIC22.09■■□□□ 1.13
HMGCLL1Q8TB92 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.09■■□□□ 1.13
HMGCLL1Q8TB92 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.09■■□□□ 1.13
HMGCLL1Q8TB92 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
HMGCLL1Q8TB92 EP400NL-214ENST00000641289 2402 ntBASIC22.08■■□□□ 1.13
HMGCLL1Q8TB92 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HMGCLL1Q8TB92 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HMGCLL1Q8TB92 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
HMGCLL1Q8TB92 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
HMGCLL1Q8TB92 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.08■■□□□ 1.13
HMGCLL1Q8TB92 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.08■■□□□ 1.13
HMGCLL1Q8TB92 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
HMGCLL1Q8TB92 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
HMGCLL1Q8TB92 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
HMGCLL1Q8TB92 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.08■■□□□ 1.13
HMGCLL1Q8TB92 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.08■■□□□ 1.12
HMGCLL1Q8TB92 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
HMGCLL1Q8TB92 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
HMGCLL1Q8TB92 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
HMGCLL1Q8TB92 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
HMGCLL1Q8TB92 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
HMGCLL1Q8TB92 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HMGCLL1Q8TB92 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HMGCLL1Q8TB92 DUSP8P3-201ENST00000399571 1760 ntBASIC22.07■■□□□ 1.12
HMGCLL1Q8TB92 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HMGCLL1Q8TB92 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.07■■□□□ 1.12
HMGCLL1Q8TB92 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
HMGCLL1Q8TB92 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.07■■□□□ 1.12
HMGCLL1Q8TB92 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
HMGCLL1Q8TB92 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
HMGCLL1Q8TB92 AC233723.2-201ENST00000623798 2106 ntBASIC22.07■■□□□ 1.12
HMGCLL1Q8TB92 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HMGCLL1Q8TB92 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
HMGCLL1Q8TB92 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
HMGCLL1Q8TB92 AC005703.6-201ENST00000623265 1329 ntBASIC22.06■■□□□ 1.12
HMGCLL1Q8TB92 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
HMGCLL1Q8TB92 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
HMGCLL1Q8TB92 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms