Protein–RNA interactions for Protein: Q8NG27

PJA1, E3 ubiquitin-protein ligase Praja-1, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PJA1Q8NG27 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.15■■□□□ 1.3
PJA1Q8NG27 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
PJA1Q8NG27 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PJA1Q8NG27 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.15■■□□□ 1.3
PJA1Q8NG27 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.15■■□□□ 1.3
PJA1Q8NG27 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.15■■□□□ 1.3
PJA1Q8NG27 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PJA1Q8NG27 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PJA1Q8NG27 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
PJA1Q8NG27 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
PJA1Q8NG27 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.14■■□□□ 1.29
PJA1Q8NG27 pRNA.6-201ENST00000610482 90 ntBASIC23.14■■□□□ 1.29
PJA1Q8NG27 pRNA.5-201ENST00000612139 90 ntBASIC23.14■■□□□ 1.29
PJA1Q8NG27 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.14■■□□□ 1.29
PJA1Q8NG27 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.14■■□□□ 1.29
PJA1Q8NG27 pRNA.11-201ENST00000618423 90 ntBASIC23.14■■□□□ 1.29
PJA1Q8NG27 pRNA.13-201ENST00000619112 90 ntBASIC23.14■■□□□ 1.29
PJA1Q8NG27 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.14■■□□□ 1.29
PJA1Q8NG27 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PJA1Q8NG27 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.29
PJA1Q8NG27 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PJA1Q8NG27 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.14■■□□□ 1.29
PJA1Q8NG27 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PJA1Q8NG27 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PJA1Q8NG27 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PJA1Q8NG27 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PJA1Q8NG27 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.13■■□□□ 1.29
PJA1Q8NG27 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PJA1Q8NG27 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PJA1Q8NG27 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PJA1Q8NG27 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.13■■□□□ 1.29
PJA1Q8NG27 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PJA1Q8NG27 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PJA1Q8NG27 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.13■■□□□ 1.29
PJA1Q8NG27 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.12■■□□□ 1.29
PJA1Q8NG27 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.12■■□□□ 1.29
PJA1Q8NG27 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PJA1Q8NG27 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PJA1Q8NG27 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
PJA1Q8NG27 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
PJA1Q8NG27 MIR6084-201ENST00000622012 110 ntBASIC23.12■■□□□ 1.29
PJA1Q8NG27 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PJA1Q8NG27 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PJA1Q8NG27 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PJA1Q8NG27 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PJA1Q8NG27 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PJA1Q8NG27 AC012414.1-201ENST00000556676 535 ntBASIC23.11■■□□□ 1.29
PJA1Q8NG27 CCDC92B-201ENST00000575506 885 ntBASIC23.11■■□□□ 1.29
PJA1Q8NG27 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PJA1Q8NG27 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PJA1Q8NG27 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
PJA1Q8NG27 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.11■■□□□ 1.29
PJA1Q8NG27 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.1■■□□□ 1.29
PJA1Q8NG27 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
PJA1Q8NG27 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
PJA1Q8NG27 IGHV3-19-201ENST00000521488 291 ntBASIC23.1■■□□□ 1.29
PJA1Q8NG27 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.1■■□□□ 1.29
PJA1Q8NG27 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.1■■□□□ 1.29
PJA1Q8NG27 AL354811.1-201ENST00000610286 706 ntBASIC23.1■■□□□ 1.29
PJA1Q8NG27 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.1■■□□□ 1.29
PJA1Q8NG27 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PJA1Q8NG27 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.09■■□□□ 1.29
PJA1Q8NG27 MIR572-201ENST00000384983 95 ntBASIC23.09■■□□□ 1.29
PJA1Q8NG27 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.09■■□□□ 1.29
PJA1Q8NG27 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.09■■□□□ 1.29
PJA1Q8NG27 NTF6G-201ENST00000591094 616 ntBASIC23.09■■□□□ 1.29
PJA1Q8NG27 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.09■■□□□ 1.29
PJA1Q8NG27 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
PJA1Q8NG27 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PJA1Q8NG27 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.09■■□□□ 1.29
PJA1Q8NG27 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PJA1Q8NG27 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PJA1Q8NG27 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.08■■□□□ 1.29
PJA1Q8NG27 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.08■■□□□ 1.29
PJA1Q8NG27 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.08■■□□□ 1.29
PJA1Q8NG27 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PJA1Q8NG27 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PJA1Q8NG27 AC092803.2-201ENST00000564287 1899 ntBASIC23.08■■□□□ 1.29
PJA1Q8NG27 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
PJA1Q8NG27 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.08■■□□□ 1.29
PJA1Q8NG27 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.08■■□□□ 1.28
PJA1Q8NG27 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.08■■□□□ 1.28
PJA1Q8NG27 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.07■■□□□ 1.28
PJA1Q8NG27 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PJA1Q8NG27 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.07■■□□□ 1.28
PJA1Q8NG27 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.07■■□□□ 1.28
PJA1Q8NG27 HLA-L-209ENST00000420110 1011 ntBASIC23.07■■□□□ 1.28
PJA1Q8NG27 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.07■■□□□ 1.28
PJA1Q8NG27 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PJA1Q8NG27 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PJA1Q8NG27 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.07■■□□□ 1.28
PJA1Q8NG27 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PJA1Q8NG27 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PJA1Q8NG27 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
PJA1Q8NG27 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.06■■□□□ 1.28
PJA1Q8NG27 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
PJA1Q8NG27 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PJA1Q8NG27 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PJA1Q8NG27 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.06■■□□□ 1.28
PJA1Q8NG27 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms