Protein–RNA interactions for Protein: Q8NE00

TMEM104, Transmembrane protein 104, humanhuman

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104Q8NE00 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM104Q8NE00 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM104Q8NE00 AC022616.5-201ENST00000518796 181 ntBASIC19.24■□□□□ 0.67
TMEM104Q8NE00 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM104Q8NE00 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM104Q8NE00 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM104Q8NE00 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM104Q8NE00 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM104Q8NE00 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM104Q8NE00 LINC00526-201ENST00000581067 1875 ntBASIC19.23■□□□□ 0.67
TMEM104Q8NE00 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TMEM104Q8NE00 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM104Q8NE00 DUX4L18-201ENST00000553347 1267 ntBASIC19.23■□□□□ 0.67
TMEM104Q8NE00 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM104Q8NE00 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM104Q8NE00 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM104Q8NE00 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TMEM104Q8NE00 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM104Q8NE00 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM104Q8NE00 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM104Q8NE00 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM104Q8NE00 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM104Q8NE00 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM104Q8NE00 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TMEM104Q8NE00 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM104Q8NE00 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM104Q8NE00 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM104Q8NE00 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM104Q8NE00 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
TMEM104Q8NE00 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.22■□□□□ 0.67
TMEM104Q8NE00 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM104Q8NE00 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM104Q8NE00 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TMEM104Q8NE00 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM104Q8NE00 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TMEM104Q8NE00 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM104Q8NE00 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM104Q8NE00 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM104Q8NE00 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM104Q8NE00 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM104Q8NE00 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM104Q8NE00 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM104Q8NE00 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TMEM104Q8NE00 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM104Q8NE00 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.21■□□□□ 0.67
TMEM104Q8NE00 AC139795.1-202ENST00000500444 432 ntBASIC19.21■□□□□ 0.67
TMEM104Q8NE00 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM104Q8NE00 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TMEM104Q8NE00 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM104Q8NE00 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM104Q8NE00 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM104Q8NE00 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM104Q8NE00 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TMEM104Q8NE00 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM104Q8NE00 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM104Q8NE00 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM104Q8NE00 AC120024.1-201ENST00000562672 995 ntBASIC19.2■□□□□ 0.66
TMEM104Q8NE00 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM104Q8NE00 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM104Q8NE00 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.2■□□□□ 0.66
TMEM104Q8NE00 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM104Q8NE00 AC079630.1-202ENST00000618127 1840 ntBASIC19.2■□□□□ 0.66
TMEM104Q8NE00 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM104Q8NE00 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM104Q8NE00 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM104Q8NE00 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TMEM104Q8NE00 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.19■□□□□ 0.66
TMEM104Q8NE00 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM104Q8NE00 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.19■□□□□ 0.66
TMEM104Q8NE00 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TMEM104Q8NE00 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM104Q8NE00 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM104Q8NE00 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
TMEM104Q8NE00 ECEL1P1-201ENST00000373592 1742 ntBASIC19.19■□□□□ 0.66
TMEM104Q8NE00 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM104Q8NE00 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM104Q8NE00 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM104Q8NE00 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM104Q8NE00 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM104Q8NE00 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM104Q8NE00 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM104Q8NE00 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM104Q8NE00 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
TMEM104Q8NE00 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM104Q8NE00 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM104Q8NE00 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM104Q8NE00 AF131216.4-201ENST00000638924 1588 ntBASIC19.18■□□□□ 0.66
TMEM104Q8NE00 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.18■□□□□ 0.66
TMEM104Q8NE00 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM104Q8NE00 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM104Q8NE00 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM104Q8NE00 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TMEM104Q8NE00 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM104Q8NE00 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM104Q8NE00 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM104Q8NE00 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM104Q8NE00 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.17■□□□□ 0.66
TMEM104Q8NE00 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TMEM104Q8NE00 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.17■□□□□ 0.66
TMEM104Q8NE00 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms