Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.96■■□□□ 1.27
SYNPOQ8N3V7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SYNPOQ8N3V7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SYNPOQ8N3V7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SYNPOQ8N3V7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SYNPOQ8N3V7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SYNPOQ8N3V7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SYNPOQ8N3V7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SYNPOQ8N3V7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SYNPOQ8N3V7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.95■■□□□ 1.26
SYNPOQ8N3V7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
SYNPOQ8N3V7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 MIR572-201ENST00000384983 95 ntBASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 IGHV3-19-201ENST00000521488 291 ntBASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 IKBKGP1-201ENST00000612193 1073 ntBASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SYNPOQ8N3V7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 DUX4L2-201ENST00000561772 1275 ntBASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 AL354811.1-201ENST00000610286 706 ntBASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 DUX4L6-201ENST00000626483 1275 ntBASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 DUX4L1-201ENST00000627662 1275 ntBASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 DUX4L8-201ENST00000629013 1275 ntBASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 DUX4L3-201ENST00000630187 1275 ntBASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 DUX4L7-201ENST00000630678 1275 ntBASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 DUX4L5-201ENST00000630834 1275 ntBASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.92■■□□□ 1.26
SYNPOQ8N3V7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
SYNPOQ8N3V7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.91■■□□□ 1.26
SYNPOQ8N3V7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SYNPOQ8N3V7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.91■■□□□ 1.26
SYNPOQ8N3V7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.91■■□□□ 1.26
SYNPOQ8N3V7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.91■■□□□ 1.26
SYNPOQ8N3V7 AL031602.1-201ENST00000633169 911 ntBASIC22.91■■□□□ 1.26
SYNPOQ8N3V7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
SYNPOQ8N3V7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.91■■□□□ 1.26
SYNPOQ8N3V7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
SYNPOQ8N3V7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.9■■□□□ 1.26
SYNPOQ8N3V7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
SYNPOQ8N3V7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.9■■□□□ 1.26
SYNPOQ8N3V7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SYNPOQ8N3V7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SYNPOQ8N3V7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SYNPOQ8N3V7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.9■■□□□ 1.26
SYNPOQ8N3V7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SYNPOQ8N3V7 ALDH1A3-203ENST00000557963 1670 ntBASIC22.9■■□□□ 1.26
SYNPOQ8N3V7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SYNPOQ8N3V7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SYNPOQ8N3V7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SYNPOQ8N3V7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SYNPOQ8N3V7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
SYNPOQ8N3V7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
SYNPOQ8N3V7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.89■■□□□ 1.25
SYNPOQ8N3V7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.89■■□□□ 1.25
SYNPOQ8N3V7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SYNPOQ8N3V7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.89■■□□□ 1.25
SYNPOQ8N3V7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SYNPOQ8N3V7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SYNPOQ8N3V7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SYNPOQ8N3V7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms