Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC31.61■■■□□ 2.65
ARHGEF28Q8N1W1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC31.61■■■□□ 2.65
ARHGEF28Q8N1W1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
ARHGEF28Q8N1W1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
ARHGEF28Q8N1W1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ARHGEF28Q8N1W1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC31.6■■■□□ 2.65
ARHGEF28Q8N1W1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
ARHGEF28Q8N1W1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ARHGEF28Q8N1W1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ARHGEF28Q8N1W1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
ARHGEF28Q8N1W1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ARHGEF28Q8N1W1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ARHGEF28Q8N1W1 AC027612.3-201ENST00000413684 1047 ntBASIC31.6■■■□□ 2.65
ARHGEF28Q8N1W1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC31.6■■■□□ 2.65
ARHGEF28Q8N1W1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
ARHGEF28Q8N1W1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ARHGEF28Q8N1W1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
ARHGEF28Q8N1W1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
ARHGEF28Q8N1W1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ARHGEF28Q8N1W1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
ARHGEF28Q8N1W1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC31.59■■■□□ 2.65
ARHGEF28Q8N1W1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ARHGEF28Q8N1W1 AC010525.1-201ENST00000585559 441 ntBASIC31.59■■■□□ 2.65
ARHGEF28Q8N1W1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ARHGEF28Q8N1W1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ARHGEF28Q8N1W1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
ARHGEF28Q8N1W1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC31.58■■■□□ 2.65
ARHGEF28Q8N1W1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
ARHGEF28Q8N1W1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
ARHGEF28Q8N1W1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
ARHGEF28Q8N1W1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
ARHGEF28Q8N1W1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
ARHGEF28Q8N1W1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
ARHGEF28Q8N1W1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
ARHGEF28Q8N1W1 IGHV3-19-201ENST00000521488 291 ntBASIC31.58■■■□□ 2.65
ARHGEF28Q8N1W1 AL499627.2-201ENST00000606283 725 ntBASIC31.58■■■□□ 2.65
ARHGEF28Q8N1W1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC31.57■■■□□ 2.65
ARHGEF28Q8N1W1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
ARHGEF28Q8N1W1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
ARHGEF28Q8N1W1 AC020928.2-201ENST00000588717 2197 ntBASIC31.57■■■□□ 2.64
ARHGEF28Q8N1W1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC31.57■■■□□ 2.64
ARHGEF28Q8N1W1 AL162430.1-201ENST00000480705 870 ntBASIC31.57■■■□□ 2.64
ARHGEF28Q8N1W1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC31.57■■■□□ 2.64
ARHGEF28Q8N1W1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ARHGEF28Q8N1W1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC31.56■■■□□ 2.64
ARHGEF28Q8N1W1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC31.56■■■□□ 2.64
ARHGEF28Q8N1W1 GRAMD4P2-201ENST00000423297 1097 ntBASIC31.56■■■□□ 2.64
ARHGEF28Q8N1W1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC31.56■■■□□ 2.64
ARHGEF28Q8N1W1 TSPY26P-201ENST00000476365 1326 ntBASIC31.56■■■□□ 2.64
ARHGEF28Q8N1W1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
ARHGEF28Q8N1W1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC31.55■■■□□ 2.64
ARHGEF28Q8N1W1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
ARHGEF28Q8N1W1 AC012414.1-201ENST00000556676 535 ntBASIC31.55■■■□□ 2.64
ARHGEF28Q8N1W1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC31.55■■■□□ 2.64
ARHGEF28Q8N1W1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
ARHGEF28Q8N1W1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
ARHGEF28Q8N1W1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC31.55■■■□□ 2.64
ARHGEF28Q8N1W1 OR2I1P-207ENST00000453522 948 ntBASIC31.55■■■□□ 2.64
ARHGEF28Q8N1W1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
ARHGEF28Q8N1W1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
ARHGEF28Q8N1W1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ARHGEF28Q8N1W1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ARHGEF28Q8N1W1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ARHGEF28Q8N1W1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC31.54■■■□□ 2.64
ARHGEF28Q8N1W1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC31.54■■■□□ 2.64
ARHGEF28Q8N1W1 SP2-202ENST00000613139 908 ntTSL 5 BASIC31.54■■■□□ 2.64
ARHGEF28Q8N1W1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
ARHGEF28Q8N1W1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ARHGEF28Q8N1W1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ARHGEF28Q8N1W1 AC133637.1-201ENST00000624115 1537 ntBASIC31.53■■■□□ 2.64
ARHGEF28Q8N1W1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ARHGEF28Q8N1W1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ARHGEF28Q8N1W1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ARHGEF28Q8N1W1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ARHGEF28Q8N1W1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
ARHGEF28Q8N1W1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ARHGEF28Q8N1W1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ARHGEF28Q8N1W1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC31.53■■■□□ 2.64
ARHGEF28Q8N1W1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
ARHGEF28Q8N1W1 AC126544.1-201ENST00000580842 1059 ntBASIC31.52■■■□□ 2.64
ARHGEF28Q8N1W1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC31.52■■■□□ 2.64
ARHGEF28Q8N1W1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ARHGEF28Q8N1W1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC31.52■■■□□ 2.64
ARHGEF28Q8N1W1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ARHGEF28Q8N1W1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
ARHGEF28Q8N1W1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ARHGEF28Q8N1W1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC31.52■■■□□ 2.64
ARHGEF28Q8N1W1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
ARHGEF28Q8N1W1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
ARHGEF28Q8N1W1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC31.51■■■□□ 2.63
ARHGEF28Q8N1W1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC31.51■■■□□ 2.63
ARHGEF28Q8N1W1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
ARHGEF28Q8N1W1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
ARHGEF28Q8N1W1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
ARHGEF28Q8N1W1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC31.5■■■□□ 2.63
ARHGEF28Q8N1W1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC31.5■■■□□ 2.63
ARHGEF28Q8N1W1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ARHGEF28Q8N1W1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ARHGEF28Q8N1W1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC31.49■■■□□ 2.63
ARHGEF28Q8N1W1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms