Protein–RNA interactions for Protein: Q8IXL7

MSRB3, Methionine-R-sulfoxide reductase B3, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3Q8IXL7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
MSRB3Q8IXL7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MSRB3Q8IXL7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MSRB3Q8IXL7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MSRB3Q8IXL7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.23■□□□□ 0.99
MSRB3Q8IXL7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MSRB3Q8IXL7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MSRB3Q8IXL7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.23■□□□□ 0.99
MSRB3Q8IXL7 MIR4281-201ENST00000580852 62 ntBASIC21.23■□□□□ 0.99
MSRB3Q8IXL7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.23■□□□□ 0.99
MSRB3Q8IXL7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.23■□□□□ 0.99
MSRB3Q8IXL7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MSRB3Q8IXL7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
MSRB3Q8IXL7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MSRB3Q8IXL7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MSRB3Q8IXL7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MSRB3Q8IXL7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.22■□□□□ 0.99
MSRB3Q8IXL7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
MSRB3Q8IXL7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MSRB3Q8IXL7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
MSRB3Q8IXL7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSRB3Q8IXL7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
MSRB3Q8IXL7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSRB3Q8IXL7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSRB3Q8IXL7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.21■□□□□ 0.99
MSRB3Q8IXL7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
MSRB3Q8IXL7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.21■□□□□ 0.99
MSRB3Q8IXL7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.21■□□□□ 0.99
MSRB3Q8IXL7 NTF6A-201ENST00000591175 560 ntBASIC21.21■□□□□ 0.99
MSRB3Q8IXL7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.21■□□□□ 0.99
MSRB3Q8IXL7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSRB3Q8IXL7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSRB3Q8IXL7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MSRB3Q8IXL7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
MSRB3Q8IXL7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.21■□□□□ 0.99
MSRB3Q8IXL7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSRB3Q8IXL7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSRB3Q8IXL7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MSRB3Q8IXL7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.2■□□□□ 0.98
MSRB3Q8IXL7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MSRB3Q8IXL7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MSRB3Q8IXL7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MSRB3Q8IXL7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.2■□□□□ 0.98
MSRB3Q8IXL7 ABHD17AP5-201ENST00000580133 923 ntBASIC21.2■□□□□ 0.98
MSRB3Q8IXL7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
MSRB3Q8IXL7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MSRB3Q8IXL7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
MSRB3Q8IXL7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.2■□□□□ 0.98
MSRB3Q8IXL7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MSRB3Q8IXL7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.19■□□□□ 0.98
MSRB3Q8IXL7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MSRB3Q8IXL7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.19■□□□□ 0.98
MSRB3Q8IXL7 AC127496.7-201ENST00000625110 1798 ntBASIC21.19■□□□□ 0.98
MSRB3Q8IXL7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MSRB3Q8IXL7 KRT18P24-201ENST00000344739 1156 ntBASIC21.19■□□□□ 0.98
MSRB3Q8IXL7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MSRB3Q8IXL7 AC004448.1-201ENST00000458332 883 ntBASIC21.19■□□□□ 0.98
MSRB3Q8IXL7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.19■□□□□ 0.98
MSRB3Q8IXL7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
MSRB3Q8IXL7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
MSRB3Q8IXL7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.19■□□□□ 0.98
MSRB3Q8IXL7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.19■□□□□ 0.98
MSRB3Q8IXL7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.19■□□□□ 0.98
MSRB3Q8IXL7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MSRB3Q8IXL7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSRB3Q8IXL7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSRB3Q8IXL7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
MSRB3Q8IXL7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSRB3Q8IXL7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MSRB3Q8IXL7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSRB3Q8IXL7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSRB3Q8IXL7 THA1P-201ENST00000590384 1145 ntBASIC21.18■□□□□ 0.98
MSRB3Q8IXL7 ESRRAP2-201ENST00000418437 1549 ntBASIC21.18■□□□□ 0.98
MSRB3Q8IXL7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSRB3Q8IXL7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSRB3Q8IXL7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
MSRB3Q8IXL7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
MSRB3Q8IXL7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MSRB3Q8IXL7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.17■□□□□ 0.98
MSRB3Q8IXL7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
MSRB3Q8IXL7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MSRB3Q8IXL7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.17■□□□□ 0.98
MSRB3Q8IXL7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.17■□□□□ 0.98
MSRB3Q8IXL7 AC004987.1-201ENST00000428627 508 ntBASIC21.17■□□□□ 0.98
MSRB3Q8IXL7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
MSRB3Q8IXL7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.17■□□□□ 0.98
MSRB3Q8IXL7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MSRB3Q8IXL7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MSRB3Q8IXL7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.17■□□□□ 0.98
MSRB3Q8IXL7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.17■□□□□ 0.98
MSRB3Q8IXL7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.17■□□□□ 0.98
MSRB3Q8IXL7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSRB3Q8IXL7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
MSRB3Q8IXL7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MSRB3Q8IXL7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
MSRB3Q8IXL7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSRB3Q8IXL7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSRB3Q8IXL7 AL353803.4-201ENST00000565882 1934 ntBASIC21.16■□□□□ 0.98
MSRB3Q8IXL7 AC242852.2-201ENST00000615738 1807 ntBASIC21.16■□□□□ 0.98
MSRB3Q8IXL7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms