Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RNF135Q8IUD6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RNF135Q8IUD6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.82■■□□□ 1.4
RNF135Q8IUD6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RNF135Q8IUD6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RNF135Q8IUD6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.82■■□□□ 1.4
RNF135Q8IUD6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.82■■□□□ 1.4
RNF135Q8IUD6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF135Q8IUD6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RNF135Q8IUD6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.82■■□□□ 1.4
RNF135Q8IUD6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.81■■□□□ 1.4
RNF135Q8IUD6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF135Q8IUD6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.81■■□□□ 1.4
RNF135Q8IUD6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
RNF135Q8IUD6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.81■■□□□ 1.4
RNF135Q8IUD6 AC245100.8-202ENST00000629247 1058 ntBASIC23.81■■□□□ 1.4
RNF135Q8IUD6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF135Q8IUD6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
RNF135Q8IUD6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
RNF135Q8IUD6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF135Q8IUD6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RNF135Q8IUD6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.8■■□□□ 1.4
RNF135Q8IUD6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF135Q8IUD6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF135Q8IUD6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF135Q8IUD6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF135Q8IUD6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF135Q8IUD6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.8■■□□□ 1.4
RNF135Q8IUD6 AC022211.4-201ENST00000625094 2161 ntBASIC23.8■■□□□ 1.4
RNF135Q8IUD6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF135Q8IUD6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF135Q8IUD6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF135Q8IUD6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF135Q8IUD6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RNF135Q8IUD6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.79■■□□□ 1.4
RNF135Q8IUD6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.79■■□□□ 1.4
RNF135Q8IUD6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.79■■□□□ 1.4
RNF135Q8IUD6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.79■■□□□ 1.4
RNF135Q8IUD6 AC009102.2-201ENST00000606772 1639 ntBASIC23.79■■□□□ 1.4
RNF135Q8IUD6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.79■■□□□ 1.4
RNF135Q8IUD6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.79■■□□□ 1.4
RNF135Q8IUD6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.79■■□□□ 1.4
RNF135Q8IUD6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF135Q8IUD6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RNF135Q8IUD6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF135Q8IUD6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF135Q8IUD6 AC123595.1-201ENST00000440769 1046 ntBASIC23.78■■□□□ 1.4
RNF135Q8IUD6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF135Q8IUD6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF135Q8IUD6 AC241377.3-202ENST00000626088 1088 ntBASIC23.78■■□□□ 1.4
RNF135Q8IUD6 AC241585.3-202ENST00000628937 1088 ntBASIC23.78■■□□□ 1.4
RNF135Q8IUD6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
RNF135Q8IUD6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF135Q8IUD6 ESRRAP2-201ENST00000418437 1549 ntBASIC23.78■■□□□ 1.4
RNF135Q8IUD6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
RNF135Q8IUD6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
RNF135Q8IUD6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF135Q8IUD6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
RNF135Q8IUD6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF135Q8IUD6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF135Q8IUD6 AC126544.1-201ENST00000580842 1059 ntBASIC23.77■■□□□ 1.4
RNF135Q8IUD6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.77■■□□□ 1.4
RNF135Q8IUD6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF135Q8IUD6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.39
RNF135Q8IUD6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
RNF135Q8IUD6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF135Q8IUD6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
RNF135Q8IUD6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF135Q8IUD6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF135Q8IUD6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF135Q8IUD6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF135Q8IUD6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF135Q8IUD6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RNF135Q8IUD6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.75■■□□□ 1.39
RNF135Q8IUD6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF135Q8IUD6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF135Q8IUD6 AC027612.3-201ENST00000413684 1047 ntBASIC23.75■■□□□ 1.39
RNF135Q8IUD6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.75■■□□□ 1.39
RNF135Q8IUD6 AC006455.2-201ENST00000429931 906 ntBASIC23.75■■□□□ 1.39
RNF135Q8IUD6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RNF135Q8IUD6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF135Q8IUD6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.75■■□□□ 1.39
RNF135Q8IUD6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF135Q8IUD6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.75■■□□□ 1.39
RNF135Q8IUD6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF135Q8IUD6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF135Q8IUD6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
RNF135Q8IUD6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF135Q8IUD6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF135Q8IUD6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RNF135Q8IUD6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF135Q8IUD6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.74■■□□□ 1.39
RNF135Q8IUD6 MIR3181-201ENST00000578512 73 ntBASIC23.74■■□□□ 1.39
RNF135Q8IUD6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RNF135Q8IUD6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF135Q8IUD6 TSPY26P-201ENST00000476365 1326 ntBASIC23.74■■□□□ 1.39
RNF135Q8IUD6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF135Q8IUD6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
RNF135Q8IUD6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.73■■□□□ 1.39
RNF135Q8IUD6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms