Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 GET4-205ENST00000441491 682 ntTSL 531.12■■■□□ 2.572e-7■■■□□ 17.1
PABPN1Q86U42 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC43.38■■■■■ 4.532e-6■■■□□ 17
PABPN1Q86U42 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC42.64■■■■■ 4.422e-6■■■□□ 17
PABPN1Q86U42 SHC1-209ENST00000444664 1305 ntTSL 533.19■■■□□ 2.91e-6■■■□□ 17
PABPN1Q86U42 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC28.75■■■□□ 2.192e-6■■■□□ 17
PABPN1Q86U42 POLR2H-207ENST00000455712 823 ntTSL 326.17■■□□□ 1.782e-6■■■□□ 17
PABPN1Q86U42 HPD-204ENST00000543163 1709 ntTSL 5 BASIC25.2■■□□□ 1.622e-6■■■□□ 17
PABPN1Q86U42 POLR2H-210ENST00000476003 648 ntTSL 223.91■■□□□ 1.422e-6■■■□□ 17
PABPN1Q86U42 POLR2H-205ENST00000443489 807 ntTSL 2 BASIC23.91■■□□□ 1.422e-6■■■□□ 17
PABPN1Q86U42 POLR2H-211ENST00000488213 1035 ntTSL 222.25■■□□□ 1.152e-6■■■□□ 17
PABPN1Q86U42 HPD-201ENST00000289004 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.072e-6■■■□□ 17
PABPN1Q86U42 POLR2H-212ENST00000489043 433 ntTSL 221.52■■□□□ 1.042e-6■■■□□ 17
PABPN1Q86U42 POLR2H-202ENST00000429568 878 ntTSL 2 BASIC21.52■■□□□ 1.042e-6■■■□□ 17
PABPN1Q86U42 POLR2H-206ENST00000452961 791 ntTSL 2 BASIC19.22■□□□□ 0.672e-6■■■□□ 17
PABPN1Q86U42 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.288e-7■■■□□ 17
PABPN1Q86U42 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.088e-7■■■□□ 17
PABPN1Q86U42 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.068e-7■■■□□ 17
PABPN1Q86U42 MROH1-211ENST00000544576 3673 ntTSL 1 (best) BASIC18.34■□□□□ 0.538e-7■■■□□ 17
PABPN1Q86U42 LAMB2-217ENST00000498377 1021 ntTSL 232.99■■■□□ 2.871e-7■■■□□ 17
PABPN1Q86U42 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.676e-7■■■□□ 17
PABPN1Q86U42 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.086e-7■■■□□ 17
PABPN1Q86U42 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC20.55■□□□□ 0.886e-7■■■□□ 17
PABPN1Q86U42 KLC4-215ENST00000479388 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.636e-7■■■□□ 17
PABPN1Q86U42 KLC4-209ENST00000467906 3604 ntTSL 215.25■□□□□ 0.036e-7■■■□□ 17
PABPN1Q86U42 LMBR1L-228ENST00000552879 568 ntTSL 423.73■■□□□ 1.393e-7■■■□□ 17
PABPN1Q86U42 SLC25A39-215ENST00000592372 867 ntTSL 333.53■■■□□ 2.966e-7■■■□□ 17
PABPN1Q86U42 CPT1B-203ENST00000395650 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.952e-6■■■□□ 17
PABPN1Q86U42 CPT1B-204ENST00000405237 2647 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.852e-6■■■□□ 17
PABPN1Q86U42 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.782e-6■■■□□ 17
PABPN1Q86U42 CPT1B-207ENST00000457250 2217 ntTSL 5 BASIC19.78■□□□□ 0.762e-6■■■□□ 17
PABPN1Q86U42 CPT1B-201ENST00000312108 2592 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.22e-6■■■□□ 17
PABPN1Q86U42 DHX38-202ENST00000562774 500 ntTSL 441.62■■■■■ 4.253e-7■■■□□ 17
PABPN1Q86U42 DHX38-214ENST00000579387 2258 ntTSL 529.14■■■□□ 2.263e-7■■■□□ 17
PABPN1Q86U42 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.33e-7■■■□□ 17
PABPN1Q86U42 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.17e-8■■■□□ 17
PABPN1Q86U42 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC29.43■■■□□ 2.37e-8■■■□□ 17
PABPN1Q86U42 NPEPL1-207ENST00000529976 4684 ntTSL 1 (best)22.62■■□□□ 1.217e-8■■■□□ 17
PABPN1Q86U42 NPEPL1-206ENST00000527587 4633 ntTSL 521.32■■□□□ 17e-8■■■□□ 17
PABPN1Q86U42 SORBS3-204ENST00000517962 885 ntTSL 221.77■■□□□ 1.085e-7■■■□□ 17
PABPN1Q86U42 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC46.34■■■■■ 5.011e-6■■■□□ 17
PABPN1Q86U42 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC44.34■■■■■ 4.691e-6■■■□□ 17
PABPN1Q86U42 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC35.34■■■■□ 3.251e-6■■■□□ 17
PABPN1Q86U42 EIF6-205ENST00000440766 798 ntTSL 233.55■■■□□ 2.961e-6■■■□□ 17
PABPN1Q86U42 EIF6-206ENST00000447927 932 ntTSL 1 (best)33.55■■■□□ 2.961e-6■■■□□ 17
PABPN1Q86U42 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC32.48■■■□□ 2.791e-6■■■□□ 17
PABPN1Q86U42 UNC13D-212ENST00000589670 668 ntTSL 336.54■■■■□ 3.446e-7■■■□□ 17
PABPN1Q86U42 CYC1-203ENST00000528618 831 ntTSL 535.98■■■■□ 3.353e-15■■■□□ 17
PABPN1Q86U42 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.973e-7■■■□□ 17
PABPN1Q86U42 HDAC6-207ENST00000430858 618 ntTSL 319.63■□□□□ 0.731e-6■■■□□ 17
PABPN1Q86U42 MBD3-205ENST00000589064 1475 ntTSL 241.95■■■■■ 4.311e-6■■■□□ 17
PABPN1Q86U42 IPO4-219ENST00000561379 624 ntTSL 431.29■■■□□ 2.66e-8■■■□□ 17
PABPN1Q86U42 SUPT6H-208ENST00000583340 581 ntTSL 316.77■□□□□ 0.288e-7■■■□□ 17
PABPN1Q86U42 ARFGAP1-222ENST00000549076 913 ntTSL 234.35■■■■□ 3.092e-11■■■□□ 17
PABPN1Q86U42 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC40.65■■■■■ 4.11e-6■■■□□ 17
PABPN1Q86U42 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.891e-6■■■□□ 17
PABPN1Q86U42 GLYCTK-208ENST00000486393 2019 ntTSL 1 (best)31.7■■■□□ 2.671e-6■■■□□ 17
PABPN1Q86U42 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC30.93■■■□□ 2.541e-6■■■□□ 17
PABPN1Q86U42 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC29.48■■■□□ 2.311e-6■■■□□ 17
PABPN1Q86U42 GLYCTK-209ENST00000489173 2083 ntTSL 527.58■■■□□ 2.011e-6■■■□□ 17
PABPN1Q86U42 RHOT2-208ENST00000562957 397 ntTSL 221.47■■□□□ 1.032e-9■■■□□ 16.9
PABPN1Q86U42 TAF1C-217ENST00000566903 2628 ntTSL 523.37■■□□□ 1.334e-7■■■□□ 16.9
PABPN1Q86U42 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.144e-7■■■□□ 16.9
PABPN1Q86U42 TAF1C-212ENST00000564774 4637 ntTSL 221.16■□□□□ 0.984e-7■■■□□ 16.9
PABPN1Q86U42 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.984e-7■■■□□ 16.9
PABPN1Q86U42 TAF1C-203ENST00000541676 3502 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.784e-7■■■□□ 16.9
PABPN1Q86U42 TAF1C-218ENST00000567759 3879 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.654e-7■■■□□ 16.9
PABPN1Q86U42 TAF1C-209ENST00000564208 3810 ntTSL 218.65■□□□□ 0.584e-7■■■□□ 16.9
PABPN1Q86U42 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.053e-13■■■□□ 16.9
PABPN1Q86U42 RHOT2-227ENST00000602564 3695 ntTSL 522.94■■□□□ 1.264e-7■■■□□ 16.9
PABPN1Q86U42 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC44.68■■■■■ 4.742e-6■■■□□ 16.9
PABPN1Q86U42 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC41.02■■■■■ 4.162e-6■■■□□ 16.9
PABPN1Q86U42 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.772e-6■■■□□ 16.9
PABPN1Q86U42 PTOV1-209ENST00000597793 1716 ntTSL 1 (best)36.25■■■■□ 3.392e-6■■■□□ 16.9
PABPN1Q86U42 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC30.16■■■□□ 2.422e-6■■■□□ 16.9
PABPN1Q86U42 PTOV1-210ENST00000598325 1438 ntTSL 529.28■■■□□ 2.282e-6■■■□□ 16.9
PABPN1Q86U42 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC28.58■■■□□ 2.172e-6■■■□□ 16.9
PABPN1Q86U42 PTOV1-218ENST00000601612 1480 ntTSL 226.02■■□□□ 1.762e-6■■■□□ 16.9
PABPN1Q86U42 PTOV1-216ENST00000601093 522 ntTSL 223.69■■□□□ 1.382e-6■■■□□ 16.9
PABPN1Q86U42 SLC25A39-217ENST00000593166 797 ntTSL 329.96■■■□□ 2.394e-7■■■□□ 16.9
PABPN1Q86U42 CENPT-227ENST00000568495 1098 ntTSL 525.55■■□□□ 1.687e-7■■■□□ 16.9
PABPN1Q86U42 HAUS5-204ENST00000430749 526 ntTSL 220.73■□□□□ 0.918e-8■■■□□ 16.9
PABPN1Q86U42 COL7A1-207ENST00000467985 709 ntTSL 538.8■■■■□ 3.83e-6■■■□□ 16.9
PABPN1Q86U42 SUPT5H-209ENST00000596208 323 ntTSL 211.77□□□□□ -0.538e-8■■■□□ 16.9
PABPN1Q86U42 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.367e-9■■■□□ 16.9
PABPN1Q86U42 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.017e-9■■■□□ 16.9
PABPN1Q86U42 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.877e-9■■■□□ 16.9
PABPN1Q86U42 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC19.43■□□□□ 0.77e-9■■■□□ 16.9
PABPN1Q86U42 CCDC14-215ENST00000479903 770 ntAPPRIS ALT2 TSL 516.21■□□□□ 0.193e-6■■■□□ 16.9
PABPN1Q86U42 JAK3-203ENST00000527031 2809 ntTSL 224.34■■□□□ 1.492e-6■■■□□ 16.8
PABPN1Q86U42 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.292e-6■■■□□ 16.8
PABPN1Q86U42 MSH5-216ENST00000484309 857 ntTSL 524.76■■□□□ 1.559e-7■■■□□ 16.8
PABPN1Q86U42 GSDMB-210ENST00000486560 318 ntTSL 323.66■■□□□ 1.383e-15■■■□□ 16.8
PABPN1Q86U42 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC30.1■■■□□ 2.413e-7■■■□□ 16.8
PABPN1Q86U42 APEH-212ENST00000469362 830 ntTSL 320.7■□□□□ 0.93e-7■■■□□ 16.8
PABPN1Q86U42 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.633e-7■■■□□ 16.8
PABPN1Q86U42 ISYNA1-214ENST00000583816 860 ntTSL 329.55■■■□□ 2.327e-7■■■□□ 16.8
PABPN1Q86U42 MYO18A-218ENST00000546105 1442 ntTSL 238.59■■■■□ 3.772e-9■■■□□ 16.8
PABPN1Q86U42 EPS8L2-228ENST00000534679 750 ntTSL 238.41■■■■□ 3.745e-13■■■□□ 16.8
PABPN1Q86U42 DCAF8-210ENST00000473382 573 ntTSL 330.4■■■□□ 2.463e-6■■■□□ 16.8
PABPN1Q86U42 DCAF8-212ENST00000476033 945 ntTSL 228.45■■■□□ 2.143e-6■■■□□ 16.8
Retrieved 100 of 8,254 protein–RNA pairs in 183.1 ms