Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 UNC93B8-201ENST00000511903 705 ntBASIC20.68■□□□□ 0.9
ZNF550Q7Z398 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ZNF550Q7Z398 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF550Q7Z398 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF550Q7Z398 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF550Q7Z398 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF550Q7Z398 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF550Q7Z398 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
ZNF550Q7Z398 AC068473.5-201ENST00000616428 2072 ntBASIC20.68■□□□□ 0.9
ZNF550Q7Z398 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF550Q7Z398 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF550Q7Z398 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 MIR6722-201ENST00000617286 78 ntBASIC20.67■□□□□ 0.9
ZNF550Q7Z398 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF550Q7Z398 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
ZNF550Q7Z398 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF550Q7Z398 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF550Q7Z398 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF550Q7Z398 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF550Q7Z398 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF550Q7Z398 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF550Q7Z398 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.66■□□□□ 0.9
ZNF550Q7Z398 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.66■□□□□ 0.9
ZNF550Q7Z398 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF550Q7Z398 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF550Q7Z398 KRT16P3-201ENST00000439127 1283 ntBASIC20.65■□□□□ 0.9
ZNF550Q7Z398 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF550Q7Z398 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ZNF550Q7Z398 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
ZNF550Q7Z398 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF550Q7Z398 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF550Q7Z398 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF550Q7Z398 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF550Q7Z398 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF550Q7Z398 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF550Q7Z398 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF550Q7Z398 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF550Q7Z398 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF550Q7Z398 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF550Q7Z398 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF550Q7Z398 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.64■□□□□ 0.89
ZNF550Q7Z398 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF550Q7Z398 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.64■□□□□ 0.89
ZNF550Q7Z398 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
ZNF550Q7Z398 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF550Q7Z398 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF550Q7Z398 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF550Q7Z398 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ZNF550Q7Z398 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF550Q7Z398 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.63■□□□□ 0.89
ZNF550Q7Z398 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.63■□□□□ 0.89
ZNF550Q7Z398 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
ZNF550Q7Z398 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF550Q7Z398 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF550Q7Z398 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF550Q7Z398 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF550Q7Z398 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF550Q7Z398 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNF550Q7Z398 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
ZNF550Q7Z398 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF550Q7Z398 AC005703.6-201ENST00000623265 1329 ntBASIC20.62■□□□□ 0.89
ZNF550Q7Z398 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF550Q7Z398 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF550Q7Z398 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.62■□□□□ 0.89
ZNF550Q7Z398 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.62■□□□□ 0.89
ZNF550Q7Z398 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF550Q7Z398 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF550Q7Z398 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF550Q7Z398 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF550Q7Z398 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF550Q7Z398 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ZNF550Q7Z398 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF550Q7Z398 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF550Q7Z398 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF550Q7Z398 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF550Q7Z398 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ZNF550Q7Z398 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF550Q7Z398 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
ZNF550Q7Z398 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.61■□□□□ 0.89
ZNF550Q7Z398 AC092028.1-203ENST00000608262 953 ntBASIC20.61■□□□□ 0.89
ZNF550Q7Z398 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF550Q7Z398 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.61■□□□□ 0.89
ZNF550Q7Z398 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms